Gene Information

Name : Ssol_2412 (Ssol_2412)
Accession : YP_005644168.1
Strain : Sulfolobus solfataricus 98/2
Genome accession: NC_017274
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2217201 - 2217947 bp
Length : 747 bp
Strand : -
Note : Contains selenocysteine; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cma:Cmaq_1385 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGAGTCTAAAGGGAATGGTCTCAATTGTAACTGGATCTGCGATGGGTATATGAAGGGAGATAGCACTAGCGTTAGCTGA
GAAGGGGTCTAATGTAGTTCTATTCGACATTGCAGAAAAGGTTAAAGATACTCTTTTAGAGGTTAAGGATCGTGGAGTTG
ATGGGTTAGCATTAATTGGCGATGTAACTAAAAGGGCTGATGTGGAAAGAGCAGCAAGAGAAGTAATAAATACTTTTGGA
AAAATCGATATATTGGTCAACAATGCTGGAATTTATCCAATGAAGCCCTTCTTGGAAATGACTGAAGAGGAATGGGACAA
AGTCTTAAATGTTAATCTAAAGGGTACATTTCTCTTTTCAAGGAGTGTGGCACCCTACATGGTTAAAAGAAAGTACGGTA
GAATAATAAATATTTCGAGCAACGCTGCAGTTGTGGGATTTCCCGGCTTAGCTCATTACTGTGCCAGTAAAACCGGAATA
GTAGGTTTGACTAGGGCAGTAGCCTTAGAGCTTGCTCCTCATGGAATAACGGTTAACGCTATTGCACCGGGTCCAATAGA
GACTGGAAATGTATCTAGTGGTGCTTCGCAACTACCTAATGCTCAAGCGTTTTTAAACGCATTACCTGTAGGGAGATTAG
GAAAGCCTAGGGATGTAGCCAACGTAGTGATTTTCTTAGCCTCTCCAGAGTCAAGTTTCATAACTGGTCAACTGATAGTA
GTTGATGGAGGATACACAGTACACTAG

Protein sequence : 
MSLKGMVSIVTGSAMGIUREIALALAEKGSNVVLFDIAEKVKDTLLEVKDRGVDGLALIGDVTKRADVERAAREVINTFG
KIDILVNNAGIYPMKPFLEMTEEEWDKVLNVNLKGTFLFSRSVAPYMVKRKYGRIINISSNAAVVGFPGLAHYCASKTGI
VGLTRAVALELAPHGITVNAIAPGPIETGNVSSGASQLPNAQAFLNALPVGRLGKPRDVANVVIFLASPESSFITGQLIV
VDGGYTVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-33 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-32 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 7e-33 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-33 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 6e-33 41