Gene Information

Name : Ththe16_0713 (Ththe16_0713)
Accession : YP_005640261.1
Strain : Thermus thermophilus SG0.5JP17-16
Genome accession: NC_017272
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 677243 - 678124 bp
Length : 882 bp
Strand : +
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence :
ATGGAGAAGGGAACCTTCCAGATCAAGACGGGCTTTGCCGAGATGTTCAAGGGCGGGGTGATCATGGACGTGACCACCCC
GGAGCAGGCGGTCATCGCCGAGGAGGCGGGGGCGGTGGCGGTGATGGCCCTGGAGCGGGTTCCGGCGGATATCCGGGCCC
AGGGGGGCGTGGCCCGCATGTCCGACCCCAAGATCATCAAGGAGATTATGGCTGCGGTGTCCATTCCCGTCATGGCCAAG
GTGCGGATCGGTCACTTCGTGGAGGCCATGATCCTCGAGGCCATCGGGGTGGACTTCATTGACGAGTCCGAGGTCCTCAC
CCCCGCCGACGAGGAGCACCACATTGACAAGTGGAAGTTCAAGGTGCCCTTCGTCTGCGGGGCGAGGAACCTGGGGGAGG
CCCTGAGGCGCATCGCCGAAGGGGCGGCCATGATCCGCACCAAGGGCGAGGCGGGGACGGGCAACGTGGTGGAGGCGGTG
CGCCACGCCCGCACCATGTGGAAGGAGATCCGCTACGTCCAGTCCCTCCGGGAGGACGAGCTCATGGCCTACGCCAAGGA
GATCGGGGCTCCCTATGAGCTTGTGAAGTGGGTCCACGAGCACGGCCGGCTTCCCGTGGTGAACTTCGCCGCCGGCGGCA
TCGCCACCCCCGCCGACGCCGCCCTCATGATGCACCTGGGCATGGACGGGGTCTTCGTGGGTTCGGGCATCTTCAAGTCC
GGGGACCCCAAGAAGCGGGCCCGGGCCATCGTGCGGGCTGTAACCCACTACAACGACCCCGAAGTCCTGGCCGAGGTGAG
CGAGGACCTGGGCGAGCCCATGGTGGGCATCAACCTGGACCAGCTCAAGGAGGAGGAGCGGCTTGCCAAGCGGGGCTGGT
AG

Protein sequence :
MEKGTFQIKTGFAEMFKGGVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAK
VRIGHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAV
RHARTMWKEIRYVQSLREDELMAYAKEIGAPYELVKWVHEHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS
GDPKKRARAIVRAVTHYNDPEVLAEVSEDLGEPMVGINLDQLKEEERLAKRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-79 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-79 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-79 69