|
Name : Ththe16_1053 (Ththe16_1053) Accession : YP_005640589.1 Strain : Thermus thermophilus SG0.5JP17-16 Genome accession: NC_017272 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1011072 - 1012550 bp Length : 1479 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: lysS2; lysyl-tRNA synthetase DNA sequence : ATGAACGACCAGACCCGCCAGCGCCTGCTCAACCTGGAAGCCTTGGTGGAGGCGGGGTTTGCCCCCTACCCCTACCGCTT CCCCAAGACCCACAGCGCCGAGGCCATCCTCAAGGCCAAGCGGGGTGCCCCCCCTGAGTCCGAGTGGCCGGAGGAGGAGG TGGCCGTGGCCGGGCGCCTCGTGGCCTTGAGGCGCATGGGCAAGGTGACCTTCGCCCACCTCCTGGACGAGACGGGAAGG ATCCAGCTCTACTTCCAGAGGGACCTCACGCCCAAGTACGAGCTCCTCAAGAAGCTGGACGTGGGGGACATCCTGGGGGT GAGGGGGCACCCCTTCACCACCAAGACGGGGGAGGTGACGGTCAAGGTCTTGGACTGGACGCCCCTGGTGAAAAGCCTCC ACCCCCTCCCCGACAAGTGGCACGGGATCCGGGACAAAGAGGTGCGCTACCGCCAGCGCTATCTGGACCTCATCGTCAAC CCCGAGGTGCGGGAGGTCTTCCGCCGCCGCTCGGAGATCGTCCGCTACATCCGGCGCTTCTTTGAGGCCAAGGGGTTTTT GGAGGTGGAGACCCCCATCCTCCAGCCCACCACGGGCGGGGCGGAGGCCAGGCCTTTCAAGACCTACCACAACGCCCTAG ACCACGAGTTTTACCTCCGTATCTCCTTGGAGCTCTACCTCAAGCGCCTCCTCGTCGGGGGGTACGAGAAGGTCTTTGAG ATCGGGCGCAACTTCCGCAACGAGGGCATTGACCACAACCACAACCCCGAGTTCACCATGCTGGAGGCCTACTGGGCCTA CGCCGACTACCAGGACATGGCCGGCCTGGTGGAAGAGCTCCTTTCGGGCCTCGTCCTCCACCTCTTCGGGAGCTACGAGG TCCCCTACCAGGGGCGGGTGCTGAACTTCAAGCCGCCCTTCAGGCGCATCTCCTTCGTGGAGGCCCTGAAGGAGAAAGCG GGCCTTCCCTTTGACCCCCTGGACCTGGAGCGCCTAAGGCTTTGGGCCGACGCCCACCACCCCGAGCTTTCCCAGGTGCC GAACTATAAGCTTCTGGACAAGCTTTTCGGCATCTACGTGGAGCCCGAGCTCCAGGATCCCACCTTTGTCTTTGACTTCC CCCTGGCCATCAGCCCCCTGGCCAAAAGGCACCGGGAGAAGCCGGGCCTCGTGGAGCGCTGGGACCTCTACGCCGGGGGG ATGGAGCTTGCCCCCTGTTACTCCGAGCTCAACGACCCCTTGGACCAGAGGGAGCGCTTCCTGGAGCAGGCGAGGCGCCG CAAGGAGGGGGACGAAGAAGCCCCCGAGCCCGACGAGGACTTCCTCCTGGCCCTGGAGTACGGGATGCCTCCGGCGGCGG GCCTGGGCCTCGGGATAGACCGCCTCGCCATGCTCCTCACCGACCAGCCCTCTCTAAGGGACGTCCTCCTCTTCCCCCTC CTCAAGCCCAAGAAGGAGGCGGTGGAAGAAGGGGTTTAG Protein sequence : MNDQTRQRLLNLEALVEAGFAPYPYRFPKTHSAEAILKAKRGAPPESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGR IQLYFQRDLTPKYELLKKLDVGDILGVRGHPFTTKTGEVTVKVLDWTPLVKSLHPLPDKWHGIRDKEVRYRQRYLDLIVN PEVREVFRRRSEIVRYIRRFFEAKGFLEVETPILQPTTGGAEARPFKTYHNALDHEFYLRISLELYLKRLLVGGYEKVFE IGRNFRNEGIDHNHNPEFTMLEAYWAYADYQDMAGLVEELLSGLVLHLFGSYEVPYQGRVLNFKPPFRRISFVEALKEKA GLPFDPLDLERLRLWADAHHPELSQVPNYKLLDKLFGIYVEPELQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGG MELAPCYSELNDPLDQRERFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLGLGIDRLAMLLTDQPSLRDVLLFPL LKPKKEAVEEGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-81 | 45 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-65 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ththe16_1053 | YP_005640589.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-82 | 45 |
