Gene Information

Name : xerD (XCR_0806)
Accession : YP_005635841.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 833503 - 834474 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGCCAGCAGTCCCGCCGAACGCCGCCAACGTGCCCAGCAACTGCCGCCCCTGCGGGCGGAGGACGATCAGGCCAT
CCAGCGCTTCCTGGATCTGTTGTGGGCCGAACAGGGCGTAGCGCGCCAGACCCTGGACAGCTATCGGCGCGATCTGGAAG
GGCTGGCGCGGTGGCGCGATGGCGCCGGCGGTGGCCTGCAGGGCGCCGACCGCAGCGCGCTATTCGACTATCTGCGCTGG
CGCACCGAGGCACGCTACGCGCCGCGCAGCAATGCGCGCCTGCTCTCGACCCTGCGCGGCTTCTACGCGCTGTGCCTGCG
CGATGGCGTGCGCAGCGACGACCCCACCGCGCTGCTGGATCCGCCGCGCTTGCCGCGCTCGCTGCCCAAGGCCCTGACCG
AAAGCCAGATCGATGCGCTGCTGGCGGCCCCGGAGATCGGCACGCCGCTGGGCCTGCGCGATCGCGCCATGCTCGAACTG
ATGTATGCGGCCGGCCTGCGCGTCAGCGAGCTGGTCACGCTGCCGGCCGTGGCGATCAACCTGCGCCAGGGCGTGCTGCG
GGTCACCGGCAAGGGCAGCAAGGAACGGCTGGTGCCGCTGGGCGAGGAATCCCAGCACTGGCTGGAACGTTATCTGGAGA
CCGCGCGGCCCACGCTGTCCGAACGCAAGGCGGTGCCAGCGGTGGACGGGCAGGTCCCCCTGTTCATCGACGCCGCGCGC
CGGCCGCTGAGCCGCCAGCAGTTCTGGGGCCTGGTCAAACGCTATGCAGCGGTTGCCGGCATCGACCCGGACACGGTCAG
CCCGCATGGTTTGCGGCACAGTTTTGCCACCCATTTGCTCAATCATGGCGCCGACCTGCGCGCGCTGCAGATGCTGTTGG
GGCACAGTTCGCTCTCCACCACGCAGATCTACACGCTGGTGGCGCGCCAGCATCTGCAGACCTTGCACGCACGGCATCAT
CCGCGCGGGTGA

Protein sequence :
MSASSPAERRQRAQQLPPLRAEDDQAIQRFLDLLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRW
RTEARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDALLAAPEIGTPLGLRDRAMLEL
MYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPLGEESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAAR
RPLSRQQFWGLVKRYAAVAGIDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHH
PRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-53 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-53 57