Gene Information

Name : XCR_3830 (XCR_3830)
Accession : YP_005638808.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4104721 - 4105566 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
GTGGTAAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAATGGATCGGGCGTGGTGCCAGCGAGCGTCGTGCGTTGGCAGT
GATCGGTATGAGCGCCAGTGCACTGCGGTATTGCCCGCGCGAAGATCGCAATGGCGAACTGCGCGAACGCATCTGTGCGT
TGGCGCATCGCCATCGCCGCTATGGCGTGGGGATGATCTATCTCAAATTGCGGCAAGAAGGGCGCATCGTGAACTACAAG
CGTGTGGAGCGGTTGTACCGCGAGCAGCAGCTGCAAGTGCGCCGCCGCAAGCGCAAGAAGGTCCCAATAGGCGAGCGTCA
ACCGCTGCTGCGGCCATCGCAGGCCAACCAGGTGTGGTCGATGGACTTCGTGTTCGACCGCACCGCCGAAGGCCGGGTGA
TCAAGTGTCTGGTGATCGTGGACGATGCAACCCACGAAGCGGTCGCCATCGAGGTGGAGCGCGCGATCTCGGGCCGCGGC
GTGACGCGCGTGCTGGACCGACTGGCACACAGTCGCGGCTTGCCGAAGGTGATCCGCACTGACAACGGCAAGGAGTTTTG
CGGTAAGGCGATGGTCGCCTGGTCGCATGCCCGTAATGTGCAACTACGGCTCATCCAGCCAGGCAAACCGAACCAGAACG
CCTACGTCGAATCCTTCAACGGCCGACTGCGCGACGAATGCCTCAACGAGCATTGGTTCCCGACGTTACTGCACGCGCAC
ACCGAAATCGAACGCTGGCGACGCGAATACAACGAGGACCGACCCAAGAAAGCAATCGGCGGCATGACGCCGGCTGCGTA
TGCCCAACATCTGGCAAACACCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MVSAPARRTLVREWIGRGASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIVNYK
RVERLYREQQLQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIEVERAISGRG
VTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWSHARNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHAH
TEIERWRREYNEDRPKKAIGGMTPAAYAQHLANTDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-58 56
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-37 41