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Name : xcsE (XCR_3764) Accession : YP_005638742.1 Strain : Xanthomonas campestris 756C Genome accession: NC_017271 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4021343 - 4022842 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGTCGACCACCACACCCACGGCCACGCTGTCGTACGCGTTTGCCAAGCGCCACGGCGTGGTGCTGCTCGGCGGCGAGAG CACCGCGCAGGCACAGGTCGGCCTGCGCGCAGGTGGCGATGTGCAGGCCTTGATCGAAGTGCGCCGCGTGCTCGGCGTGC CGTTGCAGGTGCGCACATTGGCACCGGCGGTGTTCGACCGGCATGTGTCGGAAATCTATGCCGATGCCGGGCTGGAGCAG GGCATGCCGGTGGAAGCGCTGGACCTGCACGGCAGCCTGGATTCGCTGATCGAAGACATCCCCACCGCCGATCTGCTCGA CAGCCAGGACGATGCGCCGATCATCCGCCTGATCAACGGCATCATTGCCGAGGCCGCACGCCTGGGTGCGTCCGACGTGC ATCTGGAATCGTACGAATCGCGCCTGCGCGTGCGTTTGCGCGTGGACGGCGTGATGCGCGAAGCGGCCACCTTGCCCGGG CGGATCGCGCCGTTGCTGGTCTCGCGCGTCAAGGTGATGGCGCGCCTGGATATTGCGGAAAAACGCATCCCGCAGGATGG CCGGGTGTCGTTGGCCATGGGTGCCAAGGCGCTGGATGTGCGCGTCTCTACCTTGCCCACCCGCGGCAGCGAACGCGTGG TGCTGCGTATCCTGGACAAGGAGCAGGGCACCTTGTCGCTGACCCAGTTGGGCATGCCCGCCGGTGTGATGGGCGCGGTG CAACGTGCGCTGCAGGTGCCCAACGGCATCGTGCTGGTGACCGGGCCCACCGGCTCGGGCAAGACCACGACGCTGTATGC CGGGCTGAGCCTGCTCAACGACGGTTCGCGCAACATCCTCACCGTCGAAGACCCGGTGGAATACGCCATCGACGGGGTTG GCCAGACCCAGGTCAATGCGCGCGTGGGCATGACCTTTGCCGCCGGCCTGCGTGCAATCCTGCGCCAGGACCCGGACGTG GTGATGATCGGCGAGATCCGCGATACCGAAACCGCGCAGATCGCCGTGCAGGCCAGCCTCACCGGCCACCTGGTGCTGTC CACCGTGCACACCAACGATGCGGTGGGCGCGGTCACGCGCCTGCGCGACATGGGCATCGAACCATTCCTGCTGGCCTCCA GCCTGCGCCTGATCCTGGCGCAGCGGCTGGTGCGCCGGCTGTGCACGCACTGCCGCACGCCACGGCCGCCGGATGCGGCC ACCACGCAGATGCTGGGCGCGTCTACCGATGCGGTGATCTACAGCGCCGCCGGCTGCGCTGCCTGTCACCACAGCGGCTA TGCCGGGCGCGAGGGGATCTACGAAGCCATCACTGTCGACGACACGCTGCGCCGGCTGATCGGCGACAACGCCGACGAAG ACGCATTGGCCGCCGCGGCCTTCGTACGTGCGCCACGCCTGAGCGACGCCGCGCGCGCGGCCGTGCTGCAAGGCGTGACC ACGCTGGAAGAAGCCTTGCGCGTCACCCGTCAGCAGGACGAGGCGCATGGCGAAGTTTGA Protein sequence : MSTTTPTATLSYAFAKRHGVVLLGGESTAQAQVGLRAGGDVQALIEVRRVLGVPLQVRTLAPAVFDRHVSEIYADAGLEQ GMPVEALDLHGSLDSLIEDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAATLPG RIAPLLVSRVKVMARLDIAEKRIPQDGRVSLAMGAKALDVRVSTLPTRGSERVVLRILDKEQGTLSLTQLGMPAGVMGAV QRALQVPNGIVLVTGPTGSGKTTTLYAGLSLLNDGSRNILTVEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDV VMIGEIRDTETAQIAVQASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCTHCRTPRPPDAA TTQMLGASTDAVIYSAAGCAACHHSGYAGREGIYEAITVDDTLRRLIGDNADEDALAAAAFVRAPRLSDAARAAVLQGVT TLEEALRVTRQQDEAHGEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-116 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-116 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsE | YP_005638742.1 | general secretion pathway protein E | VFG0182 | Protein | 7e-120 | 55 |
| xcsE | YP_005638742.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-116 | 52 |
| xcsE | YP_005638742.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-118 | 51 |
| xcsE | YP_005638742.1 | general secretion pathway protein E | VFG2426 | Protein | 4e-78 | 49 |
| xcsE | YP_005638742.1 | general secretion pathway protein E | VFG0112 | Protein | 1e-79 | 44 |
