Gene Information

Name : XCR_3192 (XCR_3192)
Accession : YP_005638173.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Virulence
Product : amino acid transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3356510 - 3357889 bp
Length : 1380 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACACCCCAGGCCGCAGCGACGCGGCCACGCTGGAACGCTTCGGCTACGCCCAGGAACTCAAGCGGCAGCTCAG
CCTGAAGGACCTGCTGATCTATGGCCTTGTGTTCATGGTGCCGACCGCGCCGTTCTCGATTTTCGGCGGGGTATTCGACA
TCAGCGCGGGAATGGTGCCGCTGACCTATCTGGTGGGCTTCGTGGCGATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCCTTTCCGGTGGCCGGTTCGGTGTATGCGTATGTGGGGCGCGGTTTGAGCGGCGGCATGGGATTTCTGGCCGG
CTGGGCCATCCTGCTGGACTATCTACTGGTACCCACCCTGCTCTACGTGGTCGGCGCCAACGCCATGCACAACGTGCTGC
CCCAGGTGCCGCAGCCCGCGTGGATCGCCTTCTTCGTGGTGCTCAACACGGTGGTCAATCTGCGCGGCATCGAGACCACC
GCGCGTGCCAACCGCGTCTTCCTGTATGCGCAGCTCATCGTGCTGGCGCTGTTCGTGGTGCTGGCCACACTGGCCATCCA
GCGCGGCGTCAACGGCGCACAGTGGACCCTGCGCCCGTTCTACAACCCGCAGGCATTTTCGCCGCAGTTGATTTTCAGTG
CACTGTCGGTGGCGGTGGTGTCGTTCCTGGGCTTCGATGCGATCTCCACGCTGTCGGAAGAGACCCGCGGCGGCAACCGG
GTGGTCGGACGCGCGACGCTGTTGGCGTTGGTGCTGGTGGCCGGCCTGTTCGTACTGCAGACCTGGCTGGCGGCGTTGCT
GCAGCCGCACTTGCAGCGTTACCCCAACGCGCAAGCATCCAACGATGCGTTCTTCGAGATCGGGCGGCTGATTGCCGGGC
CGTGGATGCAGATCGTGATTGCGCTGACGGTGGCCATCAGTGCGGCGATCGCCAATTCATTGGTGGCGCAGGCAGCCACC
TCGCGGCTACTGTTTGCAATGGCGCGCGACCGCCAATTGCCCGCGTTCCTGCGCTACATCCATCCGCGCACTGGCGTGCC
GCAGCGGGCGATCCTGCTGGTGGCGGCCCTGAGCATGGTGCTGGGAGAAGTGTTCGTCGGGCAGATCGCGTTGCTGTCCT
CGCTATGCAATGTGGGCGCGCTTACCGCCTTCGTGCTGCTGCATGTGGCGGTGCTTTGGCACTTTCGCGCGCATGGACGC
AAGGTGCTGCACGGAGTGGTGCCAGTGATCGGCATCGTGATCCTGGCCTATGTGCTGATCAATGCCGACCTGCATGCGCA
GCTGGGCGGCAGCGCCTGGATGGTGGTTGGACTGGCCGTACTGGCCTTCCTCAAGTTCAGCGGACGCTCAACCGAATTCC
GCGCCACTGACGCGTTGTAA

Protein sequence : 
MTDTPGRSDAATLERFGYAQELKRQLSLKDLLIYGLVFMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSGGMGFLAGWAILLDYLLVPTLLYVVGANAMHNVLPQVPQPAWIAFFVVLNTVVNLRGIETT
ARANRVFLYAQLIVLALFVVLATLAIQRGVNGAQWTLRPFYNPQAFSPQLIFSALSVAVVSFLGFDAISTLSEETRGGNR
VVGRATLLALVLVAGLFVLQTWLAALLQPHLQRYPNAQASNDAFFEIGRLIAGPWMQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPAFLRYIHPRTGVPQRAILLVAALSMVLGEVFVGQIALLSSLCNVGALTAFVLLHVAVLWHFRAHGR
KVLHGVVPVIGIVILAYVLINADLHAQLGGSAWMVVGLAVLAFLKFSGRSTEFRATDAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 5e-64 44
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 5e-64 44
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 9e-65 44
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 9e-65 44
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 6e-61 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCR_3192 YP_005638173.1 amino acid transporter VFG0480 Protein 2e-64 44