Gene Information

Name : XCR_2686 (XCR_2686)
Accession : YP_005637677.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2828622 - 2829602 bp
Length : 981 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTGACGTTCGGTGACGCTGAGGGCCTGGGCAAGCGCAAGCAGACCCGGCGGGAGATCTTCCTGGCCGAGATGGA
GCAGGTCGTCCCGTGGCAGCAACTGCTCGGTCTGATCGCGCCGCACTATCCCGTGTCGGGCCGGCCAGGTCGGCAGCCGT
ACGCACTGGCGACGATGTTGCGGATTCATCTACTGCAGCAGTGGTATGCGTTGAGCGATCCGGCCATGGAAGAAGCGCTG
CACGAGATTCCGACCTTGCGGCGCTTTGCCCAGCTCGGTGGCTTGGACGACATTCCCGACGAGACCACGATTCTCAACTT
TCGGCGCCTGCTGGAGACCCATGGCCTTGCCGCGCGGATGCTGGACGCGGTCAACGCGCATCTGGCGCGCAAGGGCCAGA
GCCTGCGGTCGGGCACGATCGTCGATGCGACGCTGATCGCGGCGCCCAGTTCGACCAAGAACGCCGACCATGCGCGCGAC
CCTGAGATGCATCAGACCAAGAAGGGCAATCAGTGGTATTTCGGGATGAAGGCGCACATTGGCGTGGATGAATTTTCCGG
GTTGGTGCACCACGTCCATTGCACAGCGGCCAATGTCGCCGATGTCACGGTGACGCACACGTTGCTGCATGGCAAAGAAG
ACAGCGTGTTTGGCGACAGCGGCTACACCGGTGCGGACAAACGCGAAGAACTGCAGGCCTGCAAGGCAGCATTCTTCATC
GCCGCCAGGCCCTCGACGCTGCAAGCCATCGGCAACAAGCGGGAGCGTGCTCGGGAACAGCGTTGGGAACACTTCAAGGC
CAGCGTGCGCGCGAAGGTGGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCGGTTACACCAAGGTCCGCTATCGCGGCC
TGGCCAAGAACACCGCGCAGGTGCTGACGCTGTTTGCGCTATCGAACCTGTGGATGAAGCGAAAGCAGTTGATGCCTGTC
GTGGGGACGGCGTGCCTGTAA

Protein sequence :
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLIAPHYPVSGRPGRQPYALATMLRIHLLQQWYALSDPAMEEAL
HEIPTLRRFAQLGGLDDIPDETTILNFRRLLETHGLAARMLDAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD
PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQACKAAFFI
AARPSTLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLMPV
VGTACL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 3e-71 65
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 4e-71 65
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-91 64
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-54 54
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 3e-61 47
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 3e-61 47