Gene Information

Name : XCR_2623 (XCR_2623)
Accession : YP_005637614.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2744705 - 2745685 bp
Length : 981 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTGACGTTCGGTGACGCTGAGGGCCTGGGCAAGCGCAAGCAGACGCGCCGGGAGATCTTTCTGGCCGAGATGGA
GCAGGTGGTTCCGTGGCAGCAATTGCTCGGGCTGGTCGCGCCGCACTATCCCGTGTCGGGCCGGCCAGGTCGGCAGCCGT
ACGCACTGGCGACGATGTTGCGGATTCATTTGCTGCAGCAGTGTTATGCGTTGAGCGATCCGGCGATGGAAGAAGCGTTG
CACGAGATTCCGACCTTGCGGCGCTTTGCCCAGCTCGGTGGCTTGGACGACATTCCCGACGAGACCACGATTCTCAACTT
TCGCCGCCTGTTGGAGACCCATGGCCTTGCCGCGCGGATGCTGGAAGCGGTCAACGCGCATCTGGCGCGCAAGGGCCAGA
GCCTGCGGTCGGGCACGATCGTCGATGCGACGCTGATCGCGGCGCCCAGTTCGACCAAGAATGCTGACCATGCGCGCGAC
CCTGAGATGCATCAGACCAAGAAGGGCAATCAGTGGTATTTCGGGATGAAGGCGCACATCGGCGTAGATGAATTTTCCGG
GTTGGTGCACCACGTCCATTGCACACCCGCCAACGTCGCCGACGTCGTGGTGACGCACACGTTGCTGCATGGCAAAGAAG
ACAGCGTGTTTGGCGACAGCGGCTACACCGGTGCGGATAAGCGCGAAGAACTGCAGGACTGCGAGGCTGCATTTTTCATT
GCTGCCAAGCGTTCGGTGCTTCAAGCCATCGGCAACAAGCGGGAGCGTGCTCGGGAACAGCGTTGGGAACACTTCAAGGC
CAGCGTGCGCGCGAAGGTGGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCGGTTACACCAAGGTCCGCTATCGCGGCC
TGGCGAAGAACACCGCGCAGGTGCTGACGCTGTTTGCGCTGTCAAACCTGTGGATGAAGCGAAAGCAGTTATTGCCTGCT
ATGGGGAGCGTGCGCCTGTAA

Protein sequence :
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALATMLRIHLLQQCYALSDPAMEEAL
HEIPTLRRFAQLGGLDDIPDETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD
PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTPANVADVVVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLLPA
MGSVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-90 64
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 3e-69 64
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 3e-69 64
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-55 54
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 1e-57 46
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 1e-57 46