Gene Information

Name : XCR_2422 (XCR_2422)
Accession : YP_005637415.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : RNA binding S1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2529677 - 2532040 bp
Length : 2364 bp
Strand : -
Note : -

DNA sequence :
ATGCACGACACCCAGCTTGCCCAGCAGATCGCCCGCACCATCGCCGATGAGATCGGTGCCCAACCCGCCCAGGCGCGCGC
CGCCATTGCCCTTCTCGACGAAGGCGCCAGCGTCCCGTTCATCGCGCGCTACCGCAAGGAAGTCACCGGCGGTCTGGACG
ACACCCAGCTGCGCAACCTCGAAACGCGCCTGACTTACCTGCGCGAACTGGAAGACCGCCGCGCCGCGATCCTGTCCAGC
ATCGGCGAGCAGGGCAAACTCAGCGACGAACTGCGCAGCGAAATCGTCGCCGCCGACACCAAGTCGCGCCTGGAAGACCT
GTATCTGCCGTACAAGCCCAAGCGCCGCACGCGTGCGCAGATTGCGCGCGAGGCCGGGCTGGAACCGCTGGCCGACACCT
TGCTGGCCGACCCAACCCAGGCGCCGGACACCACCGCAGCGATCTACGTGGATGCCGACAAGGGCGTGGCCGACGTCAAG
GCCGCACTGGAAGGCGCCCGTGCGATCCTGATGGAGCGCTGGGGCGAAGACGCCGCACTGGTCGGCGAACTGCGCGGCTG
GTTGAACGACAATGGCGTGATCCGTGCGCGTGTGGCCGAGGGCAAGGAAGAGGCCGGTGCCAAGTACCGCGACTACTTCG
ACCATGCCGAATCGCTGGCCAGGATTCCCTCGCATCGCCTGCTGGCCTTGTTCCGGGCACGCCGCGAAGAATTTCTCTAC
CTGGATCTGGACCCGGGCACCGATGCCGACGCCGGTCACCAGTATGCCGAAGGGCGTGTGGCGCGCAGTGCCGGCATTTC
CAACGAAGGCCGCCCGGCCGACCGCTGGTTGCTCGATGCCTGCCGGCTCACCTGGCGCGCCAAGCTGCACATGCACCTGC
TGCTGGACCTGTTCAACCAGGCGCGCGAAAAGGCCGAGGCCGAGGCGATTGCGGTGTTCGGCGACAATCTCAAGGACCTG
ATGCTGGCGGCGCCCGCCGGCCCGCGCGTGGTGCTGGGCCTGGACCCGGGCATCCGCACGGGCTGCAAGATCGCCGTGGT
CGACGCGACCGGCAAGCTGGTGGCCACCGAGACGATCTACCCGCACGAACCCAAGCGGCAGTGGGAGCAGTCGCTGCAGA
CGATCAAGAAGCTGTGCCTGCAGCACAACGTGGAGCTGATCGCGATCGGCAACGGTACTGCCAGCCGCGAGACCGACAAG
CTTGCCGGCGAGGCAATCGCCTTGTGCGACGGCGCCAAGCTGCAGAAGATCGTGGTCAGCGAAGCCGGCGCATCGGTGTA
CTCCGCATCTGAATTCGCCGCCAAGGAATTCCCGAACCTGGATGTCTCGCTGCGCGGTGCGGTGTCGATCGCGCGGCGCC
TGCAGGACCCGTTGGCCGAGTTGGTCAAGATCGAGCCGAAGGCAATCGGCGTGGGCCAGTACCAGCATGACGTGGACCAA
TATCGCCTGGCCAAGGCGCTGGACGCACGCGTGGAAGACTGCGTCAACGCGGTGGGCGTGTACGTCAATACCGCCTCGGC
GGCCTTGCTGTCACGCGTGTCGGGCCTGTCCAGTACGGTGGCGGAAAACATCGTGCGGCATCGCGACGACAACGGCCCGT
TCAAGCGCCGCAAGGACCTGCTGAAGGTTCCGCGCCTGGGCGACAAGACCTTCGAACAATGTGCCGGCTTCCTGCGCATT
GCCGACGGCGATGAGCCGCTGGATGTGTCGGCGGTGCACCCGGAGGCCTATCCGGTGGTGGAGCGCATCGTCAGCAGCAC
CGGCAAGCCGATCAAGGCCTTGCTGGGCGATGGCAGCTTCCTGCGCGCGCTCAAGCCGGAGCAGTTCACCGACGAGCAAT
TCGGTGTGCCCACCGTGCGCGACATCCTCAAGGAAATGGAAAAGCCCGGCCGCGACCCGCGCCCGGAATTCAAGGCGGCG
CAGTTCGCCGAGGGCATCGAGGACATCAAGCACCTCAAGCCCGGCATGATCCTGGAGGGCGTGGTCAGCAACGTCGCGGC
CTTTGGCGCATTCGTCGACATCGGCGTGCACCAGGACGGCCTGGTCCACATCTCGGCGCTGTCGGACACCTTCGTCAAGG
ACCCGCGCGACGTGGTCAAGGCCGGCGACATCGTCAAGGTCAAGGTGCTGGAAGTGGACGTGGCGCGCAAACGCATCGCG
CTGACCCGGCGGTTGTCGGATCCGCCGCCACCGGCCGACGCGGCCGCGCAGTCACGCGACACACGTGGCGCGGGGCAGGG
GCGGCGCGACGGAAGCGGTGGTGGCGGGCGCGGCCCGGCAGCCGGCACTGCCAAGCCGCGGACCAGCGCGCCGCCCGCCA
ACAACGCATTGGCCGACGCCTTCGCGCGCGCCAAACGCAGCTGA

Protein sequence :
MHDTQLAQQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEDRRAAILSS
IGEQGKLSDELRSEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADTLLADPTQAPDTTAAIYVDADKGVADVK
AALEGARAILMERWGEDAALVGELRGWLNDNGVIRARVAEGKEEAGAKYRDYFDHAESLARIPSHRLLALFRARREEFLY
LDLDPGTDADAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWEQSLQTIKKLCLQHNVELIAIGNGTASRETDK
LAGEAIALCDGAKLQKIVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVSSTGKPIKALLGDGSFLRALKPEQFTDEQFGVPTVRDILKEMEKPGRDPRPEFKAA
QFAEGIEDIKHLKPGMILEGVVSNVAAFGAFVDIGVHQDGLVHISALSDTFVKDPRDVVKAGDIVKVKVLEVDVARKRIA
LTRRLSDPPPPADAAAQSRDTRGAGQGRRDGSGGGGRGPAAGTAKPRTSAPPANNALADAFARAKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62