Gene Information

Name : lolD (XCR_2391)
Accession : YP_005637389.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2498634 - 2499374 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAATGTTCCAGAGTCAGTGCTTGGAAAGACGCAGGCAGACCAGGGCGCGGCGGTGATTCGCGCCGAACGGCTGGG
TAAGACCTACGCCGAAGGTAAGATGCGTACGCCGGTGTTCGATGGTCTGGATCTGTCGGTGGCGACCGGCGAAACCGTGG
CGATCGTCGGCGCATCCGGTGCAGGCAAGAGCACCTTGCTGCACTTGCTCGGTGGGCTGGATATCCCGACCTCCGGCGAG
GTGTATGTCGCGGGTCGGCGCATGTCTGCATTGTCCGATGGCGAGCGCGGCAAGCTGCGTAACCGCTCGCTCGGTTTCGT
GTATCAGTTCCATCATCTGTTGCCGGAATTCACTGCGCTGGAAAACGTCATGATGCCGGTGGTGTTGTCCGGGCAGGACG
TGGCGATCGCGCGCGGGCAGGCACTGCAGTTGCTGGAATCGGTCGGCCTGGGACATCGGGTGGAGCACAAGCCCAGCGAG
CTGTCGGGTGGCGAGCGTCAGCGCTGTGCGGTGGCGCGGGCGTTGGTGAACAAGCCCGGCTGCGTGCTCGGCGATGAGCC
CACCGGCAATCTCGACGACAAGACGGCTGGCACCGTGTTCGAGCTGATGCTGGAACTCAATCGCGCCCAGCGCACGAGCC
TGGTGCTGGTAACGCACGATCGTAGCCTGGCGCGACGTCTGGACCGCATTCTTGAATTGCACCAAGGCAAGTTGCGCGAA
CTGGCGCCTTCGGCGGTGTAA

Protein sequence : 
MSNVPESVLGKTQADQGAAVIRAERLGKTYAEGKMRTPVFDGLDLSVATGETVAIVGASGAGKSTLLHLLGGLDIPTSGE
VYVAGRRMSALSDGERGKLRNRSLGFVYQFHHLLPEFTALENVMMPVVLSGQDVAIARGQALQLLESVGLGHRVEHKPSE
LSGGERQRCAVARALVNKPGCVLGDEPTGNLDDKTAGTVFELMLELNRAQRTSLVLVTHDRSLARRLDRILELHQGKLRE
LAPSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005637389.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-38 44
lolD YP_005637389.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 6e-31 42