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Name : XCR_2370 (XCR_2370) Accession : YP_005637373.1 Strain : Xanthomonas campestris 756C Genome accession: NC_017271 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein VipA-tviB Function : - COG functional category : - COG ID : - EC number : - Position : 2481220 - 2482512 bp Length : 1293 bp Strand : - Note : - DNA sequence : ATGTCCCGCACCCCGCCGTTCGACCCGCTGCAGGCGCGTATCGCCGTCATCGGCCTGGGCTACGTCGGCCTGCCGCTGGC CGTCGCGTTCGGTGAGCAGCGCGACACGCTGGGCTTCGATATCGATGCGCAGCGCGTGGCGCAGTTGCAGCAGGGCCACG ATGCCACGCTGGAACTGGACGATGCGGAACTCGCCGCTGCAGGGCAGTTGCGCTACACCGCCGACGCTGCAGAACTTGCG GGCTGCACGATCTTCATCGTGACCGTGCCGACGCCGATCGACAGCTTCGAGCAACCGGATCTGGAGCCATTGCGTAGCGC CACTGCCTTGATCGCTGCTGCACTCAAGCCCGGCGATCTGGTGATCTACGAATCCACGGTTTATCCGGGAACCACTGAAG AAGTGTGCGTGCCCTTGCTCGAAGCAGGCTCCGGGCTGCGCTTCAACCACGATTTCTTCTGTGGCTACAGCCCCGAGCGC GTCAATCCCGGCGATCGCCAGCGGCGTCTGCGCGACATCCGCAAGATCACCTCCGGCTCCACACCCAACGCCGCGGACGC GGTGGACGCGCTCTACGCCAGCATCATCACGGCCGGCACGTGGCGCGCCGGATCGATCCGCGTGGCCGAAGCGGCCAAGG TGGTTGAGAACATCCAGCGCGACGTCAACATTGCGCTGGTCAACGAGCTGGCGCTGATCTTCGACAAGCTCGGCATCGAC ACGCTCGATGTGCTCGAAGCCGCCGGCACTAAGTGGAATTTCCTCCCATTCCGGCCCGGTCTGGTCGGCGGGCATTGCAT CGGTGTGGACCCGTATTACCTGCTGCACAAATCCGAGAGCGTGGGTTACCACCCGGACCTGATCCACACTGCGCGGCAGG TGAACAATCGCGTTGGCCGCCACGTGGCTGAGCGCGTTTGCAGCTTGCTCGCGGCGCAAGGGATTGCACCACCGCAGGCG CGAGTGCTGGTGCTCGGCGCCACCTTCAAGGAGAACTGCCCGGATCTGCGCAACAGCCGTGCCCTGGAACTGGTGCAGCT GCTGCAGGCCGCCGGCGCGCAGGTCGATACCTGCGACCCGTGGGCCGATCCCGAAGACGCGCTGCGCCACGGCGGCGTGC AGCTGTGCGAGACGCCGGAAGAGGGCGCCTACGATGCCGTGGTCCTGGCGGTGGCGCATGCGCAGTACCGCGACTACGAT GCGCAGCGCATCGCCGCACTCGGCAAGCCGGGCGCGGTGTTCTATGACGTCAAATCGGTGTGGCCGCGCGCGTCGGTCAA CGCTCGGCTGTAG Protein sequence : MSRTPPFDPLQARIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLQQGHDATLELDDAELAAAGQLRYTADAAELA GCTIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTTEEVCVPLLEAGSGLRFNHDFFCGYSPER VNPGDRQRRLRDIRKITSGSTPNAADAVDALYASIITAGTWRAGSIRVAEAAKVVENIQRDVNIALVNELALIFDKLGID TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSLLAAQGIAPPQA RVLVLGATFKENCPDLRNSRALELVQLLQAAGAQVDTCDPWADPEDALRHGGVQLCETPEEGAYDAVVLAVAHAQYRDYD AQRIAALGKPGAVFYDVKSVWPRASVNARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-109 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-109 | 52 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-91 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XCR_2370 | YP_005637373.1 | VI polysaccharide biosynthesis protein VipA-tviB | VFG0431 | Protein | 1e-109 | 52 |
