Gene Information

Name : XCR_2162 (XCR_2162)
Accession : YP_005637165.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : ISxcc1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2240820 - 2241086 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAAGAGCAAGTTCACCGAGAGCCAGATCGTCGCCACGCTGAAGCAGGTCGAGGGCGGTCGCCAGGTCAAGGATGT
CTGTCGCGAGCTGGGCATTTCCGATGCGACGTACTACGTCTGGAAGTCCAAGTACGGCGGCATGGAGGCCGCTGACGTGC
AACGCCTCCGCGACCTGGAGACTGAGCACAACAAGCTCAAACGTATGTACGCCGATCTCGCGATGGAAAACCATGCATTG
AAGGATGCCATCGCAAAAAAGCTGTAG

Protein sequence :
MRKSKFTESQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEAADVQRLRDLETEHNKLKRMYADLAMENHAL
KDAIAKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-26 65
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-20 50
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-20 50
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-17 49
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-17 49
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 4e-17 47
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-17 47