Gene Information

Name : XCR_2042 (XCR_2042)
Accession : YP_005637047.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2100317 - 2101162 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
GTGGTAAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAATGGATCGGGCGTGGTGCCAGCGAGCGTCGTGCGTTGGCAGT
GATCGGTATGAGCGCCAGTGCACTGCGGTATTGCCCGCGCGAAGATCGCAATGGCGAACTGCGCGAACGCATCTGTGCGT
TGGCGCATCGCCATCGCCGCTATGGCGTGGGGATGATCTATCTCAAATTGCGGCAAGAAGGACGCATCGTGAACTACAAG
CGTGTGGAACGGTTGTACCGCGAGCAGCAGCTGCAAGTGCGCCGCCGCAAGCGCAAGAAGGTCCCAATAGGCGAGCGTCA
ACCGCTGCTGCGGCCAGCGCAGGCCAACCAGGTGTGGTCGATGGACTTCGTGTTCGACCGCACCGCCGAAGGGCGGGTGA
TCAAGTGTCTGGTGATCGTGGACGATGCAACCCACGAAGCGGTCGCCATCGAGGTGGAGCGCGCGATCTCGGGCCACGGG
GTGACGCGCGTGCTGGACCGACTGGCGCACAGTCGCGGTTTGCCGAAGGTGATCCGCACTGACAACGGCAAGGAGTTTTG
CGGTAAGGCGATGGTCGCCTGGTCGCATGCCCGTAATGTGCAACTACGGCTCATCCAGCCAGGCAAACCGAACCAGAACG
CCTACGTCGAATCCTTCAACGGCCGACTGCGCGACGAATGCCTCAACGAGCATTGGTTCCCGACGTTACTGCACGCGCAC
ACCGAAATCGAACGCTGGCGACGCGAATACAACGAGGACCGACCCAAGAAAGCAATCGGCGGCATGACGCCGGCTGCGTA
TGCCCAACATCTGGCAAACACCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MVSAPARRTLVREWIGRGASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIVNYK
RVERLYREQQLQVRRRKRKKVPIGERQPLLRPAQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIEVERAISGHG
VTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWSHARNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHAH
TEIERWRREYNEDRPKKAIGGMTPAAYAQHLANTDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-58 55
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-37 41