|
Name : XCR_0198 (XCR_0198) Accession : YP_005635246.1 Strain : Xanthomonas campestris 756C Genome accession: NC_017271 Putative virulence/resistance : Resistance Product : solute:sodium symporter family protein Function : - COG functional category : - COG ID : - EC number : - Position : 228482 - 230209 bp Length : 1728 bp Strand : + Note : - DNA sequence : ATGAGCAAGACTTCGCGCCTTCTCCTGATTCTGGCCGGCCTGCTGCCGGCCGGCCTCGCGCTGGCCGCCGGCGGCGACAT GGGCCAGGTCGACAAGCAACCCACCAACTGGGTGGCGATCGGCATGTTCGGCTTCTTCGTGCTGGGCACCTTGTGGATCA CCAAATGGGCGGCCGCCAAGACCAAGTCGGCGGCTGACTTCTACACCGCCGGCGGTGGCATCACCGGCTTTCAGAACGGC CTGGCGATCGCGGGCGACTTCATGTCGGCGGCCTCGTTCCTGGGCATCACCGCGGCGGTGATGGCCAACGGCTACGACGG CCTGATCTACGCGATCGGCTTTCTGGTCGGCTGGCCCATCCTGACCTTCCTGATGGCCGAACGGCTGCGCAACCTCGGCA AGTACACCTTCGCCGACGTGGCCGGCTACCGCTTCGCGCCGACCGCCATCCGCAGCTTTGCCGCATCGGGCACGCTGGTG GTGGTGCTGTTCTATCTGATTGCACAGATGGTCGGCGCCGGTGCGTTGATCAAGTTGCTGTTCGGCCTGGACTACTGGGT GGCGGTCACCCTGGTCGGCGTGCTGATGATGATCTACGTGCTGTTCGGCGGCATGACCGCCACCACCTGGGTGCAGATCA TCAAGGCGGTGCTGCTGCTGACCGGCGTGACCTTCATGGCCGTGGCGATCATGTGGCACTTCAACTTCAGCTTCGAGGCG TTGTTTGCCGAGGGCGTGCGGGTGAAGACCGCGATTGCGGCCAATGGCGGTGCATCGCCTGAGGATGCAGCCAAGGCGGG CCTGTCGATCATGGGGCCGGGCGGCTTTGTGAAAGACCCGATTTCGGCGATCTCCTTCGGCATGGCGCTGATGTTCGGTA CCGCCGGGCTGCCGCACATCCTGATGCGCTTCTTCACCGTTCCCGATGCCAAGCAGGCACGCAAGTCGGTGCTGTGGGCC ACCACCTGGATCGGCTACTTCTACATCCTGATCTTCATCATCGGCTTCGGTGCGATCGCGCTGGTGCTGACCAACCCGCA GTTCGCCGATGTCGCCACCGGCACCATCCACGGCGGCAAGGGCGCGGCCAACATGGCGGCGGTGCTGGTCGGTAACGCCG TAGGCGGCAACGTGTTCATGGGCTTCATCTCGGCGGTAGCCTTTGCCACCATCCTGGCGGTGGTCGCAGGCCTGACCCTG TCCGGCGCCTCGGCGGTGTCGCATGACCTGTACGCCACGGTGATCAAGAAGGGCAACCCGGCGCCGGGTTCGGAGCTGAA GGTCTCGCGTGCCACCACCCTGGTGCTGGGCGTGATCGCCGTGCTGCTGGGCATCGTGTTCGAGAAGCAGAACGTGGCCT TCATGGTGTCGCTGGCCTTCGCCATCGCCGCCTCGGCCAACTTCCCGGTGCTGATCCTGTCCTTGTTGTGGAAGAACTGC ACCACGCGTGGTGCGGTGGTCGGCGGCTTCCTGGGCCTGATCTCCTCGCTGGTGCTCACGGTGCTGTCGCCGTCGGTGTG GGTGGACACGCTGGGTAACGCGGCCGGTTCGGCGCCGTTCCCGTACACCTCGCCGGCGCTGTTCTCGATGACGATTGGTT TCGTCGGTATCTGGCTGTTCTCGGTCCTGGACCGCAGCCCGCAGGCGGCCAACGAGCGCGCCGCGTTCAAGGCGCAGCAG ATCCGTGCCGAAACCGGTTTGGGTGCGTCCGGTGCCTCCGGTCACTGA Protein sequence : MSKTSRLLLILAGLLPAGLALAAGGDMGQVDKQPTNWVAIGMFGFFVLGTLWITKWAAAKTKSAADFYTAGGGITGFQNG LAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPILTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLV VVLFYLIAQMVGAGALIKLLFGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA LFAEGVRVKTAIAANGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKQARKSVLWA TTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGKGAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTL SGASAVSHDLYATVIKKGNPAPGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNC TTRGAVVGGFLGLISSLVLTVLSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLFSVLDRSPQAANERAAFKAQQ IRAETGLGASGASGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 7e-98 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XCR_0198 | YP_005635246.1 | solute:sodium symporter family protein | BAC0564 | Protein | 1e-121 | 64 |
| XCR_0198 | YP_005635246.1 | solute:sodium symporter family protein | BAC0570 | Protein | 1e-109 | 60 |
