Gene Information

Name : hrcL (XCR_1487)
Accession : YP_005636504.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Virulence
Product : type III secretion protein HrcL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1515856 - 1516479 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
GTGCTGGAACTGGACGCAGCGGGTGCACAGGTGCACGCGCGTTGCGCGCAGGCGCTGGCGGACGCCCAGACGCGTGCGCA
GGCGCTGCTCGACGCTGCCCAACGGCAGGCCGAGGCCATCCTTCAGGATGCCCACGACAGGGCCGAGCGCAGTGCACGCC
TGGGCTATGCCGCCGGGCTGCGCCGTCAGCTCGACGCGTGGAACGAGCGCGGCGTGCGGCATGCCTTCGCGGCCCAGGAC
GCCGCACGGCGCGCCCGCGAGCGCCTGGCCGAGATCGTCGCGCACGCCTGCGAGCAGGTTCTGCACGGGCACGATCCTGC
GGCGCTGTACGCGCGCGCCGCACAGGCGCTGGACGGCGCCCTGGACGAGGCGAACGCCCTGCAGGTGAGCGTGCATCCCG
ATGCGCTGGACGATGCACGGCGCGCCTTCGATGCGGCCGCAGCGGCCGGCGGATGGAGCATGCCGGTGGAACTGTGCGGT
GATACGACTCTGGCCTTGGGTGCCTGCGTGTGCGAATGGGATACCGGCGTGTTCGAGACCGATCTGCGTGATCAGCTGCG
CAGTCTCCGGCGCGTCATTCGCCGCGTGTTGGCCACGCCGCAGGCGGTGCCGGATGCTTGCTGA

Protein sequence : 
MLELDAAGAQVHARCAQALADAQTRAQALLDAAQRQAEAILQDAHDRAERSARLGYAAGLRRQLDAWNERGVRHAFAAQD
AARRARERLAEIVAHACEQVLHGHDPAALYARAAQALDGALDEANALQVSVHPDALDDARRAFDAAAAAGGWSMPVELCG
DTTLALGACVCEWDTGVFETDLRDQLRSLRRVIRRVLATPQAVPDAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3007 YP_244075.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 1e-37 99
hrpB5 NP_636609.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 9e-38 99
hrcL YP_362162.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 6e-28 77
hrpB5 AAB08460.1 HrpB5 Virulence Hrp PAI Protein 4e-28 77
hrpB5 AAF61282.1 HrpB5 Virulence Hrp PAI Protein 4e-29 77
hrpB5 AAP34340.1 HrpB5 Virulence Hrp PAI Protein 6e-30 77
hrpB5 YP_198729.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 5e-29 77
hrpB5 NP_640766.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 8e-30 77
hrpB5 BAB07853.1 HrpB5 Virulence Hrp PAI Protein 4e-29 77