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Name : hrcV (XCR_1481) Accession : YP_005636498.1 Strain : Xanthomonas campestris 756C Genome accession: NC_017271 Putative virulence/resistance : Virulence Product : type III secretion protein HrcV Function : - COG functional category : - COG ID : - EC number : - Position : 1510292 - 1512214 bp Length : 1923 bp Strand : - Note : - DNA sequence : ATGCGCGTAACACGGTATTTTGCATACACCGGTGAAGTGGCGATCGCCGCCTTGGTGGTGGCGGTCATCGGCTTGATGAT CCTGCCGCTGCCTACCCCGCTGATCGATACGCTGCTGGGCATCAACATCACGCTGAGCGTGGTGTTGCTGATGGTCACGA TGTATGTGCCCGACTCGATCTCGCTGTCGTCGTTTCCCTCGTTGCTGCTGTTCACCACGCTGCTGCGGCTGTCGTTGAAC ATCGCATCGACGAAATCGATCCTGCTGCACGCCGAAGCCGGCCACATCATCGAGAGCTTCGGCGAGCTGGTGGTGGGCGG CAATCTGGTGGTGGGCCTGGTGGTGTTCCTGATCATCACCACGGTGCAATTCATCGTGATCGCCAAAGGTTCCGAGCGCG TTGCGGAAGTCGGCGCGCGCTTCACCCTGGATGCGATGCCGGGCAAGCAGATGAGCATCGACGCCGACCTGCGCGGCGGC AATCTGACTGCAGACGAAGCACGCCGCAAACGCGCCCGGCTGGCCATCGAGAGTCAACTGCACGGCGGCATGGATGGCGC CATGAAATTCGTCAAGGGCGATGCGATCGCCGGCCTGGTGATCACCATGGTCAACATCTTGGCCGGCATCGTGGTAGGCG TGACCTACCACGGCATGAGCGCGGGCGAGGCCGCCAACCGCTTTGCGATCCTGTCGGTAGGCGATGCGATGGTGTCGCAG ATCGCCTCGCTGCTGATCTCGGTGGCGGCCGGCGTCATGATCACCCGCGTCGCCAACGAGAATGAAACCAAGATCAGCTC GCTCGGGCTCGACATCGGCCGCCAGCTCACCAGCAACGCACGTGCCTTGATGGCAGCGAGTGTGCTGCTGGCCTGCTTTG CGTTCGTGCCGGGATTTCCGGCGCTGCTGTTCCTGCTGCTGGCAGCGGCGGTCGGTGCCGGGGGCTATACGATCTGGCGC AAGCAACGCGACACCAGCGGGAGCGATCAGCCCGCACTGCCATCAACCAGCCGCAAAGGTGCCAAAGGCGATGCGCCGCA CATCCGCAAGAGCGCCCCGGATTTCGCCTCGCCCTTGTCGATGCGGCTTTCGCCGCAACTGGCTGCACGGCTCGACCCGG CGCTGCTGGATCAGGCGATCGAAAGCGAGCGGAGGCAATTGGTCGAGCTGCTGGGATTGCCGTTCCCGGGGATCGCGATA TGGCAGAGCGAATCCCTGCAGGGCCTGCAGTACGAAGTGTTGATCCACGACGTGCCCGAGACCCGTGCTGAATTGAACGA CACCGCAGACATGCAAAAGGCACTGGCCCAGCAGGCCATTGCGCCGCTGCATGCACGCGCGCACCTGTTCGTCGGCATCC AGGAGACGCAGTGGATGCTGGAACAGGTCGGCGCGGACTATCCCGGGCTGGTTGCAGAGGTCAACAAGGCCATGCCAGCC CAACGCATCGCCGATGTGTTGCGGCGACTGCTGGAAGAACGCATCCCGGTGCGCAACATCAAGAGCATCCTGGAGAGCCT GGTGGTGTGGGGACCGAAGGAAAAGGATCTGCTGATGCTGACCGAGTATGTGCGCTGCGATCTCGGCCGCTATCTTGCGC ACACCGCGACCGCAGGCACCGGACAGCTGCCTGCGGTGATGCTCGACCACGCCGTGGAACAGTTGATCCGGCAGTCGATT CGCGCCACACCGGCCGGCAATTTCCTGGCGCTGCCACCGGAGCAGGCCAATCAGCTGGTCGAGCAGGTGGAACGCATCGT CGAAGATCAGGCGCGGCATCCACTGGCAGTGGTCGCCTCGATGGACGTGCGGCGTTATGTGCGCCGCATGATCGAGGCAC GCCTGAACTGGCTGGAGGTGTATTCGTTCCAGGAACTGGGCGCAGAGGTGCAGCTGCAGCCGATCGGCAGAGTGGTGGCC TGA Protein sequence : MRVTRYFAYTGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG NLTADEARRKRARLAIESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMSAGEAANRFAILSVGDAMVSQ IASLLISVAAGVMITRVANENETKISSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPALLFLLLAAAVGAGGYTIWR KQRDTSGSDQPALPSTSRKGAKGDAPHIRKSAPDFASPLSMRLSPQLAARLDPALLDQAIESERRQLVELLGLPFPGIAI WQSESLQGLQYEVLIHDVPETRAELNDTADMQKALAQQAIAPLHARAHLFVGIQETQWMLEQVGADYPGLVAEVNKAMPA QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI RATPAGNFLALPPEQANQLVEQVERIVEDQARHPLAVVASMDVRRYVRRMIEARLNWLEVYSFQELGAEVQLQPIGRVVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | YP_005636498.1 | type III secretion protein HrcV | VFG0064 | Protein | 1e-101 | 45 |
| hrcV | YP_005636498.1 | type III secretion protein HrcV | VFG0384 | Protein | 5e-92 | 42 |
| hrcV | YP_005636498.1 | type III secretion protein HrcV | VFG0198 | Protein | 2e-89 | 42 |
