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Name : XCR_1459 (XCR_1459) Accession : YP_005636476.1 Strain : Xanthomonas campestris 756C Genome accession: NC_017271 Putative virulence/resistance : Virulence Product : type III secretion translocon protein HrpF Function : - COG functional category : - COG ID : - EC number : - Position : 1484687 - 1487353 bp Length : 2667 bp Strand : + Note : - DNA sequence : ATGAATGACTCCGATCTGTTGCTGGCGATGGACAACCTGTTTCTGCAGCAGATTTACCTTTTGATTGCCGCCACCTACGG CAATACGTCGCTCAATGGGCCAGGCAGTGGTATTCCGGGGCTTGACACGCCTTCAGCAGACGACCTTCAAGCCAGCCAGC CGATTGAGAAACGGACCTCCTGGCCGACGCTATCGGCTCCGTTCAATGCCAAGGACATCAAGGGATCCAGGTTGCCGCCT GCGGTGGATGGGTCATCGGTGACCTGGGAGGGCGGCACGCTCACCCCATCGGAGCTTCAGATTGTTTCGACACTCAATCA GCACAAAGACAAGACGCCGCTGGAGTTCGCAAAACTCGACGACAAGATCAATGATCCATCTACACCTCCGGATCTGAAGA GTGCGCTGCAAGGCTTGCAGAAAGATCCGCGTCTTTTCTTCGCCATCGGTTCGCAGGGCGACGGCAAATGCGGCGGCAAG ATCAAGGCGGGTGATTTGTGGGATTTTGCAGACCACCATCAACAGGTGACCGCTCTGGGCGGGAAGAATGCCGAGTTCAA CCCTAAAAACATCAAGGGAGCGACACCGCCTCCTGCCGCAGAAGGTTCGTCGGTAACCTGGGACGGCGGCACGCTGACGC AATCCCAGCTTGAGATCGTCTCTACGCTCAATCAGCATCGCGACATGATGCCGATCGAGTTCGCCAAGCTCGATGAAAAG ATCAACGACCCAGCCACTCCGCCCGACCTGAAAAAAGCGCTGCAGGGCCTGCAACAGGATCCTGGCCTGTTCTTTGCGAT GGCGTCTCAGGGTCACGGCAAGCACCACCACGACGACCAGGGCAAGTGCAACGGCAAGCTCATCGCCGACAATCTTTACG ACTTCGCCGACCGCCATCCGCAGGTGACGGCGCAGGGCGGCAAGAACGCGACCTACAATCCCGAAAAAATGAAGGGGCGC GACCTGCCGCCGCCGGTGGACGGCTCTTCGGTCACGTGGGATGGCGGGACGCTCACCCAGAACGAATTGGAGATCGTCGC CACACTTAATCGCCACAAGGACAAGTGCCCAGTCAAGTGGACAGATCTCGATGCAAAGTCGAAGGATCCCGCCATCCCGC CGGATCTGCAAAAAGCGTTTGCAGATCTACAGCAAGATCCAGCTCTTTTTCATGCAATTGGTGCGCAGGGTAGCAAAGGA AGTTGCGATGGAAAATTCACTGAAAAGGATCTCACACGCTTTTCAGTGCCCGAAAAACACGCACAGATCGCTCAATATGC CGAGCAGCAAGCAAAGGGCTACACGCAAAACTATGTGGCGTCTGACAGCCCCGACAAGACCGAGCCGACGGTCATGACCG AGAGTGACGCGATGCGTGAACTCTACCGCTACTCGGACTATCTGCCCAAGGATCTAAACCAGGACGCGTTCAAGCAATTG GTCGAAGGCGACAGCACGACCAAGAAGAGCCCGCCGCAGGTCATTGCCGCCGCACAGTATTTTCGTGAGCATCCCGACCA GTGGAAAGCGCTGGCTGGCGACAAAGAGTCGATGAGCACGGCAGATTTCCTGCAGAAATCTACATCAGAGATGCACCTGA CCGTGCCCGAACTGAAAACGCTGGACACCATCAATAGCCACCAGGAAGCGTTCTTCGGCGACGGCAAAGAGGTAACGCGC GACAAGCTCGACACGATTGTCAAGGATGATAAAGCCGACCCCGCAGTGCGCGACGCGGCCAAGCAACTTTTGGGCGACCC GCTACTGTTCGGCTTGTTGAACAACGCGATCACCGGCTACAAGAAGCCCCACAGCTTCTTCGGTGGTGGCCATGTCGTCG ACTCGGGAAAGATCAGCAACAAAGATTTTCAGCAGTTCTACGAGCACATGACGGCGGTCAACAAAACCCTGGATACACCG CCCACGCATGCAGCCACATCGCCCGAGCAAAAGAAGGCCGTCGCGGACATGCTGATGGGAAAAGCCGATCAGCCCGAGAT CAAGAGGAAAAAACACGATGTCGGTACCTTCAGCAAGGGATTGCATGAGTTTCTCAAGTGGGACAGCAAGATCCTGGATG GGATTTCCGTAGCACTTAGTGCAATGAACGGCATTCCCCTGATCGGCGAGTTTGCCGATGCAGCAGCGCTAGCATTTGAG AGCGAAGCGCAGGCAGCACAGGTAATTGATACCGCACTGCAAGGTGGCAACCTGTCACTCGCGTGGAAACTCGCCGGCAT CAATATGGCTGGAGCGGTGGTTGGCGCCGTTGGCGGACCCACGGCCAGACTCGCAGCCAAGGGAGCAGCCAAGGGGGTCG CCGAGGGCGCAGCCAAGGGAGCGACCCAGGGTACAACCAAGGGCGCGGCCAAAGGAGGCGGCAAGGGAGTAGCCGAGCGG GAAAAACCCCGTGATATTGCTAAAGGCTACATAATAGGTACTAGCATCAACAGGCCGACTGAAATGTTGAAAACTCCCGT GTTGGCAGGCTTGCACTATGAAGAAGTGCGGCTGGATAAGGAGAGGAAAAAGGGCGAGATTCGCAAGAATCTGGAAGCGG CGGGCGGGGTGCCATTGGGGAAACAGTTTATTCCAAGAGCAATTGCCGACAACTTCGAGGCAGACACGAAAGAAAACCTC AGGCATGTGAGGGGGCGCCGCAAGTAA Protein sequence : MNDSDLLLAMDNLFLQQIYLLIAATYGNTSLNGPGSGIPGLDTPSADDLQASQPIEKRTSWPTLSAPFNAKDIKGSRLPP AVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGK IKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEK INDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKLIADNLYDFADRHPQVTAQGGKNATYNPEKMKGR DLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKG SCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQL VEGDSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTVPELKTLDTINSHQEAFFGDGKEVTR DKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTP PTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGEFADAAALAFE SEAQAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAKGAAKGVAEGAAKGATQGTTKGAAKGGGKGVAER EKPRDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKERKKGEIRKNLEAAGGVPLGKQFIPRAIADNFEADTKENL RHVRGRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 67 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 67 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 66 |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
