Gene Information

Name : VCLMA_A0724 (VCLMA_A0724)
Accession : YP_005633398.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Unknown
Product : Phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 822877 - 824196 bp
Length : 1320 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGAGACAGACAAAACAGCTATCCGCTACGGAAGTCAAAAACGCTAAGGCAAAAGAGAAAGAGTATTACCTCGTAGA
CGGTCAAGGATTGAAACTGCGAGTACTTCCGAGTGGCTCTAAGCAATGGCTATTCAACTACTATCGCCCTACAAACGGTA
AACGCGCTAATCTCAACTTAGGCCGATTTCCTGATGTTTCTCTTGTTCAGGCCCGTAAAGCCTCTTTGAATGCCAAAGAG
CTGATCGCCCAAGGCATTGATCCACAAGATGAACGAAAGCGCCAACAGCAAGCCCACAAAGAAATCCATGAGCACACCTT
TGTGAACGTGGCGAAAGATTGGTTCGCAATCAAACAGCACGATGTGACGCCTGATTACGCCCTTGATATCTGGCGTTCAT
TAGAGCTACATATCTTCCCGCATATTTCTGACAAACCGGTAAAAGCGATCACTGCACCGGAGATCATAGAACTACTCAAA
CCGATTGAAGCCAAAGGTAGCCTAGAAACCGTCAAACGCTTAACACAGCGACTCAATGAAGTGATGAACTTCGCCACTAA
CTGCGGTCTTATCCAGGCCAATCCATTAACTGGCATCAAAGCCGCCTTCAAGAAACCGAAAAAAGAAAATATGGCGGCAC
TGACACCGGCGGAGCTGCCCGAACTCATGGGCGCGATCGCTAATGCAAGTATCAAACGCACTACCCGTTGTTTGCTTGAG
TGGCAATTGCATACCATGACGCGCCCAGCGGAAGCATCTGGTGCCCGTTGGGATGAAATTAATTGGGAAGAAAATGTTTG
GACCATTCCTGCTGAAAGAATGAAAAAAAGAAGAGAGCACCGCATCCCGCTCACTGAGCAGATGCTGGCGCTATTGGAAG
TGATGAAGCCGATAAGTGGCCATCGTGATTTTGTTTTTCCGTCAGATAGAGACCCAAAGAAGCCCTGCAACAGCCAAACG
GCAAACATGGCACTCAAACGTATGGGGTTTGCTGGTCGGCTTGTTAGCCACGGTTTACGTTCTCTCGCGAGTACCACTCT
CAACGAGCAAGGCTTTGATCCCGATTTGGTAGAAGCAGCGTTGGCCCACGTTGACGATAATCAGGTCCGCAGTGCCTATA
ACCGCACTGACTACCTTGAGCGCAGAAAGCCAATGATGTGCTGGTGGAGCGGGCATATAGAAGAGGCCGCCAGAGGTAGC
CTCTCTGTAACTCCACGTGCTGGTGAACAGGGGCGCGGATTTGCTGTAGTAGCAGATGAAGATGAAATTATTGGCCAACT
TACCGAACAGTCTTCAAACGGTGAATTATTTGAAAAATAG

Protein sequence : 
MPRQTKQLSATEVKNAKAKEKEYYLVDGQGLKLRVLPSGSKQWLFNYYRPTNGKRANLNLGRFPDVSLVQARKASLNAKE
LIAQGIDPQDERKRQQQAHKEIHEHTFVNVAKDWFAIKQHDVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLK
PIEAKGSLETVKRLTQRLNEVMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMGAIANASIKRTTRCLLE
WQLHTMTRPAEASGARWDEINWEENVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFVFPSDRDPKKPCNSQT
ANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVEAALAHVDDNQVRSAYNRTDYLERRKPMMCWWSGHIEEAARGS
LSVTPRAGEQGRGFAVVADEDEIIGQLTEQSSNGELFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-178 90
int AAK20773.1 integrase Not tested VPI Protein 8e-179 90
int AAK20803.1 integrase Not tested VPI Protein 8e-179 90
unnamed AAA82714.1 integrase Not tested VPI Protein 8e-179 90
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-178 90
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-108 53
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-101 53
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-101 53
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-101 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A0724 YP_005633398.1 Phage integrase VFG1092 Protein 1e-101 53