Gene Information

Name : VCLMA_A0684 (VCLMA_A0684)
Accession : YP_005633360.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 779780 - 781411 bp
Length : 1632 bp
Strand : -
Note : -

DNA sequence : 
ATGACAACCGATTTTACCCCTTGGCCAGAGGCACTTGCCGCTCAATACCGTCAGTTAGGCTACTGGCAAGATAAAACCTT
GCTCGATTACTTACAACAAAGTGCTGAGCGTACCCCCAATGCGCTTGCGCTGGTGGATGATAATCAGCAGTGGCGTTACC
AAGCCATGCTCGAACGTATTGAGCAGCTTGCTGCCGGATTTACCGAACTTGGGCTAGGCTGTGGCGATAACGTAGTGCTG
CAATTAGGCAATGTCGCGGAATTCTATTTATGCTTTTTCGCTTTGCTGCGCCAAGGCATACGACCGATTCTGGCGCTCCC
CGCTCACCGTTTAGCGGAAATTCGCTATTTTTGTCAGCACAGCCAAGCCAAAGCTTACCTCATTGATGGTGCTCAACGAC
CATTTGACTATCAAGCTTTGGCGCAAGAGCTGCTTGCTTGCTGCCCAACACTGCAGACTGTGATTGTACGCGGCCAAACT
CGAGTGACAGATCCAAAATTTATTGAACTGGCGAGTTGCTACTCGGCATCATCTTGTCAAGCGAATGCCGACCCGAATCA
AATCGCCTTTTTCCAACTTTCCGGTGGCACAACGGGCACGCCCAAGCTCATCCCGCGTACCCACAATGATTACGCCTACA
GCGTAACCGCCAGTGTCGAAATTTGCCGTTTTGATCAGCATACTCGCTATCTGTGCGTACTGCCCGCGGCACATAACTTC
CCTCTCAGCTCCCCCGGCGCACTCGGTGTTTTCTGGGCGGGTGGCTGCGTTGTCCTCAGTCAAGATGCGTCACCCCAACA
CGCGTTTAAATTGATAGAACAGCATAAAATTACTGTTACCGCGTTGGTGCCGCCTTTAGCACTACTCTGGATGGATCACG
CAGAAAAAAGCACCTGCGATCTCTCCTCATTGCACTTTGTGCAAGTAGGCGGGGCAAAATTTAGTGAAGCGGCCGCAAGG
CGTCTGCCGAAAGCGCTAGGCTGCCAATTGCAACAAGTGTTTGGAATGGCAGAAGGCTTGGTCAATTACACTCGTTTGGA
TGACAGTGCGGAAGTGATTGCGACAACTCAAGGTCGGCCTATCTCCGCTCACGATCAATTACTGGTGGTTGATGAGCAGG
GTCAACCTGTCGCCAGCGGAGAAGAAGGGTATCTGTTAACCCAAGGTCCCTATACGATTCGCGGTTACTATCGAGCTGAT
CAGCACAATCAACGAGCGTTCAATGCACAAGATTTTTACATCACCGGCGATAAAGTCAAACTCAGTAGCGAAGGTTACGT
AATTGTGACCGGAAGGGCCAAAGATCAGATCAATCGTGGAGGGGAAAAGATTGCCGCCGAAGAGGTGGAAAATCAGCTTT
TACATCATCCAGCAGTGCATGATGCCGCTTTAATTGCCATCAGTGACGAATACCTAGGAGAGCGCAGTTGCGCGGTGATC
GTACTCAAACCCGAGCAGTCGGTGAATACCATCCAGCTCAAACGTTTTTTACACCAAGCGGGGCTCGCCGATTACAAAAT
CCCAGATCAGATCCAATTTATCGATCAACTGCCCAAAACATCGGTTGGAAAAATCGATAAGAACGCGCTTCGTCGTCGAT
TTGACACGCTCGGCTTAGCGTTAATGTCGTGA

Protein sequence : 
MTTDFTPWPEALAAQYRQLGYWQDKTLLDYLQQSAERTPNALALVDDNQQWRYQAMLERIEQLAAGFTELGLGCGDNVVL
QLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQALAQELLACCPTLQTVIVRGQT
RVTDPKFIELASCYSASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNF
PLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTCDLSSLHFVQVGGAKFSEAAAR
RLPKALGCQLQQVFGMAEGLVNYTRLDDSAEVIATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRAD
QHNQRAFNAQDFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVI
VLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRRRFDTLGLALMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 7e-96 47
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-95 47
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 1e-95 47
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-95 47
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-95 47
ybtE CAA21394.1 - Virulence HPI Protein 1e-95 47
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-96 46
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 7e-96 46
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 1e-95 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A0684 YP_005633360.1 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 1e-121 51
VCLMA_A0684 YP_005633360.1 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 1e-119 48
VCLMA_A0684 YP_005633360.1 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 5e-104 44