Gene Information

Name : VCLMA_A0245 (VCLMA_A0245)
Accession : YP_005632957.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : Lysine/cadaverine antiporter membrane protein CadB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 268631 - 269968 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence : 
ATGTCATCAAATGCAAAGAAAATCGGCCTGATCGCCTGTACGGGTGTGGTGGCTGGCAACATGATGGGCAGTGGTATTGC
TCTGCTTCCTTCTACGCTAGCGAGCGTAGGTTCAATTTCCATTTATAGCTGGCTGATCTGCATTGTTGGCGCACTCAGTT
TGGCGTTTGTGTTTGCTCGTTTGGCAACCAAAAACCCGCAAGAGGGTGGCCCGATTGCTTATGCAGGGGAAGTGTCACCG
GTGTTTGGTTTCCAAACGGGCGTGCTTTACTACCACGCTAACTGGATTGGTAATTTGGCGATTGCGATTACCGGTGTTTC
TTACCTTTCGGTGTTCTTCCCGGTGCTGAATAACCCGATCCCTGCTGGTTTAGCGACCATTGCTTCGGTTTGGCTATTTA
CCTTAGTCAACTTGCTTGGTGGTAGCTGGGTAAGCCGCTTATGTACCATTGGTTTGGTGCTGATTTTGATCCCTGTAGTC
GGTACGGCTCTGTTTGGTTGGACGCACTTTGACAGCGCGCTCTACAGCCAAAACTGGAACGTGTCTGCTGGTAGCGATGG
CCATGCGGTGATCACCGCAGTGCTGATTTGTCTGTGGTCTTTCGTGGGTGTCGAATCGGCAGCGGTTTCTTCTGGTATGG
TCGAAAACCCAAAACGCACGGTGCCACTGGCAACCATGTTAGGTACTGGTCTTGCGGGCCTTATCTATGTGCTATCAACT
CAAATGATCAGCGGTATGTTCCCTGCCTCTGAAGTGGCGGCATCGGGTGCACCTTTTGCACTGGCGACCACAGCACTGTT
TGGTAGCTGGACTGCGCCATTCGTGTCTGCCTTTACTGCACTAGCGTGTTTCACGTCACTTGGCTCTTGGATGATGCTGG
TCGGCGAAGCGGGCAAACGTGCCGCTAACGATGGCAACTTCCCGAAAGTATTCGGTGAAACCGATCGCAACGGTGTACCG
AAAAAAGGTCTGCTGATTGCTTCCAGCATGATGACATTGCTGATGCTGGTGCTGATGTTCTTCAGCTCAGAAACTGCGCA
CGCTTCCGATCTGTTTAACCAACTGACTACCGATGCGGTTCTGCTGACCATGCTGCCTTATTTCTACTCCAGCATTAACC
TGATCCGCTTCGAAGGCATGACCACTCGCAATACGTTTGTGATGTTGTTCTCCGGTATTGCCAGCCTGTTCTGTATGGTG
GCGCTGGCTGGTGCAGAGGGTTCAACCTTGACTGCAACCTTCATCATGTCACTGATTATTTTGATGTTCTACAGCAAAAA
AGCGGGTCTGGATAAATACCTCGAGACTCATCCACAACAAGCTTCGGCTCAGTTCTGA

Protein sequence : 
MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLATKNPQEGGPIAYAGEVSP
VFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVV
GTALFGWTHFDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLST
QMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVP
KKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMV
ALAGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQASAQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 2e-127 70
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 2e-127 70
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-132 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A0245 YP_005632957.1 Lysine/cadaverine antiporter membrane protein CadB VFG1671 Protein 1e-132 68