Gene Information

Name : VCLMA_A2060 (VCLMA_A2060)
Accession : YP_005634656.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2340916 - 2342262 bp
Length : 1347 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTATCTCAAGCAAAGTATTTACCTCAAGAAATTATCCGCAGAAAGCGTGATGGTGAAGTTCTTACCAACGATGA
AATCAACTTCTTCATTCAAGGTGTAGCGAATAACACCGTCTCTGAAGGTCAAATCGCTGCTTTTGCGATGGCGATTTTTT
TCCGTGAAATGACTATGCCTGAGCGTATTGCACTGACGTGCGCGATGCGCGATTCCGGTATGGTGATTGATTGGAGCCAC
ATGAATTTTGATGGTCCGATTGTGGATAAACACTCCACGGGCGGCGTGGGCGATGTGACCTCACTGATGCTTGGCCCTAT
GGTGGCAGCCTGTGGCGGTTATGTGCCGATGATTTCTGGCCGCGGCCTTGGCCACACCGGGGGGACGCTCGACAAACTTG
AAGCCATCCCCGGCTATAACATTACCCCAAGCAATGACGTGTTTGGCAAAGTGACCAAACAAGCCGGCGTGGCGATCATC
GGCCAAACTGGCGATCTGGCTCCGGCGGATAAGCGTGTGTACGCAACGCGTGATATTACCGCGACGGTGGATAACATCTC
GCTGATCACCGCTTCAATTCTTTCTAAGAAACTGGCGGCTGGCCTTGAATCGCTCGTGATGGATGTGAAAGTGGGCTCTG
GTGCTTTCATGCCAACTTACCAAGCGTCTGAAGAGCTCGCCAAATCGATCGTGGCAGTGGCCAACGGTGCAGGCACCAAT
ACCACGGCGATTTTAACTGATATGAACCAAGTGCTGGCGTCCTCTGCTGGTAACGCGGTGGAAGTGCGTGAAGCAGTACG
TTTCCTCACCGGCGAATACCGCAATCCGCGTCTGCTGGAAGTCACTATGGCGTCGTGTGCCGAAATGCTGGTACTTGGCA
AGTTAGCCAAAGATACCGTGCAAGCGCGTGAGAAACTGCAAGCAGTGCTGGATAACGGCAAAGCCGCCGAGCGTTTTGGC
AAAATGGTGGCAGGCCTCGGTGGCCCAAGCGATTTTGTTGAAAACTACGACAAGTATCTTGCGAAAGCTGAGATTGTTCG
CCCAGTTTACGCTCAGCAATCTGGCGTTATTTCTGCGATGGATACCCGTGCCATCGGCATGGCGGTGGTCGGCATGGGCG
GTGGCCGCCGTGTGGCGACCGATCGTATCGATTACGCTGTCGGCTTTGATCAGTTTATCCGTCTGGGTGAAATCGCCGAC
AGCAACAAACCTTTAGCAATGATTCATGCCCGCAATGAAGAGCAGTGGCAACAAGCTGCCAATGCACTACAAAATGCGAT
TAAAGTGGGTGGTGATTACGTACCAACACCGGATGTTTACCGTCAAATTCGAGCACAAGACGTGTAA

Protein sequence :
MSLSQAKYLPQEIIRRKRDGEVLTNDEINFFIQGVANNTVSEGQIAAFAMAIFFREMTMPERIALTCAMRDSGMVIDWSH
MNFDGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGYNITPSNDVFGKVTKQAGVAII
GQTGDLAPADKRVYATRDITATVDNISLITASILSKKLAAGLESLVMDVKVGSGAFMPTYQASEELAKSIVAVANGAGTN
TTAILTDMNQVLASSAGNAVEVREAVRFLTGEYRNPRLLEVTMASCAEMLVLGKLAKDTVQAREKLQAVLDNGKAAERFG
KMVAGLGGPSDFVENYDKYLAKAEIVRPVYAQQSGVISAMDTRAIGMAVVGMGGGRRVATDRIDYAVGFDQFIRLGEIAD
SNKPLAMIHARNEEQWQQAANALQNAIKVGGDYVPTPDVYRQIRAQDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 1e-55 41