Gene Information

Name : VCLMA_A1563 (VCLMA_A1563)
Accession : YP_005634173.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : transcriptional regulator, AlpA like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1788765 - 1788965 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGAGAACAATATTCGTTTAATCCGCTTTCGAGAAGTGCTGGCCATGACAGGTTTGTCGCGTTCCAGCATGTACCG
CTTTATCGAAGAAAACCAGCTCCCTACCCAAGTTCAGCTCGGTGGTCGCGCTGTTGCTTGGGTGGAGAGTGAAGTGCAGG
AGTGGATTGCTCAACGGATCACCAATCGTCGAGTGGATTAA

Protein sequence :
MSENNIRLIRFREVLAMTGLSRSSMYRFIEENQLPTQVQLGGRAVAWVESEVQEWIAQRITNRRVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 7e-24 93
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-23 90
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-23 90
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 8e-13 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-10 46
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 46
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1563 YP_005634173.1 transcriptional regulator, AlpA like protein VFG1141 Protein 8e-24 90
VCLMA_A1563 YP_005634173.1 transcriptional regulator, AlpA like protein VFG1118 Protein 5e-11 46