Gene Information

Name : VCLMA_A1548 (VCLMA_A1548)
Accession : YP_005634162.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Unknown
Product : transposase OrfAB subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1775267 - 1776280 bp
Length : 1014 bp
Strand : -
Note : -

DNA sequence : 
TTGTATTTGAAAATCATTGAAGCATTTAACCATGGTAAACATGATGAAGTCGCAGCGTTGATGGATAAAGTGATTGCGAT
TATTCGAGTATTGGTCGAATACGGCGGTGTTGCGGCAGGTAAAGTTGCCATGCAGTTACATGGTATTGATGCTGGGGATC
CCCGCTTACCTATTCGTTCATTGAATGACAACAGAAAGCGGATGTGCTTGCGAAGATGTCACTATTGGCTTAAACGCCCA
GCGTTAATTAATGCGGAAACAATAAAACTGCGCAGCTTGATTAGCGAGGCTCACGCCGCAAGCAATGGCTCTGCGGGAGC
GAGAACCATTGCAGATATAGTCACAAATCAGGGTGTAAAGCTGAGCCGATACCGAGCAACAAAGCTAATGAGAACTCTTG
GTTTAGTAAGCTGCCAAGAACCAAAGCATCGTTACAGAAAGGCTTCACAAGAACATATTGACGTTCCAAATCACTTAAGT
CGTCAATTTGCTGTTACGGCTCCAAATGAAGTCTGGGCTGGCGATGTTACGTATATTTGGACTGGTAATCGGTGGATGTA
TTTAGCGGTCGTTATCGATCTTTTTGCCCGCAAAGTGATCGGTTGGTCAATGTCTTTGTCGCCTGATAGTCGGTTGACAG
GTAAAGCGCTGTCTATGGCCTATGAATCTCGCGGAAAGCCAAAAGGTGTCATGTTCCATAGCGATCAAGGCAGTCATTAT
ACTAGCCGTAAATACCGTCAATTACTGTGGCGCTTTCAAATAAAACAGAGTTTATCTCGCCGAGGAAACTGTTGGGATAA
TGCGCCGATAGAGCGCTTCTTTAGAAGTCTGAAGACGGAATGGGTGCCAACTGTGGGTTATCGTAGCTTCGCTGAGGCTC
AACAAGAGATCACCCGCTACATTATCGGATATTACTGCCAACTCAGGCCACATCAGTATAACGGTGGTCTAACTCCCAAT
GAATCAGAACGATTATATTGGGAAAACTCTAAAACCGTGGCCAATTTTAGTTGA

Protein sequence : 
MYLKIIEAFNHGKHDEVAALMDKVIAIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDNRKRMCLRRCHYWLKRP
ALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLS
RQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHY
TSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPN
ESERLYWENSKTVANFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-123 100
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-123 100
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-123 100
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 8e-123 100
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 8e-123 100
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-123 100
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-123 100
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-123 100
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 8e-73 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1548 YP_005634162.1 transposase OrfAB subunit B VFG1122 Protein 3e-123 100