|
Name : VCLMA_A1547 (VCLMA_A1547) Accession : YP_005634161.1 Strain : Genome accession: NC_017270 Putative virulence/resistance : Virulence Product : DNA repair protein RadC Function : - COG functional category : - COG ID : - EC number : - Position : 1774847 - 1775263 bp Length : 417 bp Strand : + Note : - DNA sequence : ATGACTCATTTTCCTCGCCACCGCTATCTACTCTCGCAACGAGCTTATGAGCATCGAGTACTGGAAGAAGCAGCAGAGAT CCTTGAACAGCGTTATGTGCGCGGTGAAACCTTTGCACGTACGGAAAACACCACGGAATACTTACGCTGTAAACTTGCTG GATACGAGCACGAAATGTTTGCCGTACTGTTTTTGGATAACCAGCATCGGCTAATTGAATTTAAGGAGCTATTTCGCGGT ACGGTCGATGCCGCCAGTGTCTACCCAAGAGAGGTGCTAAAGGAGGCACTAAACGTTAACGCAGCAGCGGTGATCTTTGC CCATAACCACCCCTCTGGCGATCCGGAGCCTTCACAAGCCGATAGGCGTATTACTCAGCGCTTAAAAGACGCCTTATCAC TGGTCGATATTCTGTAG Protein sequence : MTHFPRHRYLLSQRAYEHRVLEEAAEILEQRYVRGETFARTENTTEYLRCKLAGYEHEMFAVLFLDNQHRLIEFKELFRG TVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1786 | NP_231421.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 5e-60 | 99 |
| VC0395_A1383 | YP_001217326.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 5e-60 | 99 |
| VPI2_0034 | ACA01849.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 5e-60 | 99 |
| VC0510 | NP_230161.1 | DNA repair protein RadC-like protein | Not tested | VSP-2 | Protein | 1e-40 | 72 |
| ECO103_3589 | YP_003223446.1 | radC-like protein YeeS | Not tested | LEE | Protein | 3e-19 | 48 |
| yeeS | YP_854323.1 | radC-like protein YeeS | Not tested | PAI I APEC-O1 | Protein | 9e-20 | 48 |
| c5152 | NP_757000.1 | radC-like protein yeeS | Not tested | PAI II CFT073 | Protein | 9e-20 | 48 |
| yeeS | AAZ04458.1 | putative RadC-like protein | Not tested | PAI I APEC-O1 | Protein | 6e-20 | 48 |
| unnamed | CAD66203.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 1e-19 | 48 |
| radC | AAN62275.1 | putative DNA repair protein RadC | Not tested | PAGI-3(SG) | Protein | 2e-21 | 48 |
| radC | AAN62140.1 | putative DNA repair protein RadC | Not tested | PAGI-2(C) | Protein | 1e-24 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCLMA_A1547 | YP_005634161.1 | DNA repair protein RadC | VFG1119 | Protein | 2e-60 | 99 |
| VCLMA_A1547 | YP_005634161.1 | DNA repair protein RadC | VFG1678 | Protein | 6e-20 | 48 |
