Gene Information

Name : VCLMA_A1546 (VCLMA_A1546)
Accession : YP_005634160.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1774527 - 1774703 bp
Length : 177 bp
Strand : -
Note : -

DNA sequence : 
ATGAGATTTCTGAAACTAAAAGAAGTAATGGAAAAGACCGCACTAAGCCGTTCAGCAATTTACCGCAAAATGAATGATGG
CGAGTTTCCACAGTCGGTGAGCTTGGGAGAAAGGGCTATTGCCTGGGTGGAAAGCGAAGTGGATGAGTGGATGGACTTTT
GTCTTAAACAGCGATGA

Protein sequence : 
MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-22 100
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-22 100
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-22 100
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-13 58
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-08 49
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-09 46
unnamed CAA21398.1 - Not tested HPI Protein 3e-09 46
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-10 45
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 45
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 5e-08 43
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1546 YP_005634160.1 transcriptional regulator VFG1118 Protein 8e-23 100
VCLMA_A1546 YP_005634160.1 transcriptional regulator VFG1141 Protein 7e-11 45