Gene Information

Name : VCLMA_A1545 (VCLMA_A1545)
Accession : YP_005634159.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : Sialidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1772034 - 1774379 bp
Length : 2346 bp
Strand : +
Note : -

DNA sequence :
ATGCGTTTCAAAAACGTAAAGAAAACCGCTTTAATGCTTGCTATGTTCGGTATGGCGACAAGCTCAAACGCCGCACTTTT
TGACTATAACGCAACGGGTGACACTGAGTTTGACAGCCCTGCCAAGCAGGGATGGATGCAAGACAACACGAATAATGGCA
GTGGTGTTTTAACCAATGCAGATGGAATGCCCGCTTGGTTGGTGCAAGGTAATGGAGGGAGAGCTCAATGGACATATTCT
CTCTCTACTAATCAACATGCCCAAGCATCAAGTTTCGGTTGGCGAATGACGACAGAAATGAAAGTGCTCAGTGGTGGCAT
GATCACAAACTACTACGCCAACGGCACTCAGCGTGTCTTACCCATCATTTCATTAGACAGCAGTGGTAACTTAGTTGTTG
AGTTTGAAGGGCAAACTGGACGCACCATTTTGGCAACCGGCACAGCAGCAACGGAATATCATAAATTTGAATTGGTATTC
CTTCCTGGAAGTAACCCATCCGCTAGCTTTTACTTTGATGGCAAACTCATTCGTGACAACATCCAGCCGACTGCATCAAA
ACAAAATATGATCGTATGGGGGAATGGCTCATCAAATACGGATGGTGTCGCCGCCTATCGTGATATTAAGTTTGAAATTC
AAGGCGACGTTATCTTCAGAGGCCCAGACCGTATACCATCCATTGTGGCAAGTAGTGTAACACCAGGGGTTGTAACCGCG
TTTGCAGAGAAACGTGTGGGCGGTGGCGACCCCGGTGCTCTGAGTAATACCAATGACATCATCACTCGTACCTCACGAGA
TGGCGGCATAACTTGGGATACAGAGCTCAACCTCACTGAGCAAATCAATGTCAGTGATGAATTTGATTTCTCGGATCCTC
GGCCTATCTATGATCCTTCCACCAACACAGTTCTTGTCTCTTACGCTCGATGGCCGACCGATGCCGCTCAAAACGGAGAT
CGAATAAAACCATGGATGCCAAACGGTATTTTTTACAGCGTCTATGATGTTGCATCAGGGAATTGGCGAGCGCCTATCGA
TGTTACCGATCAGGTGAAAGAACGCAGTTTCCAGATCGCAGGTTGGGGTGGTTCAGAACTGTATCGCCGAAATACCAACC
TAAATAGCCAGCAAGACTGGCAATCAAACGCTAAGATCCGAATTGTTGATGGCGCTGCAAACCAGATACAAGTTGCCGAT
GGTGGCCGAAAATATGTTTTCACACTGAGTATTGATGAATCAGGCAGTCTAGTCGCTAATCTAAATGGTGTTAGTGATCC
AATTATCCTGCAATCTGAACGCGCGAAGGTACATTCTTTCCATGACTACGAACTTCAATATTCGGCGTTAAACCGCAGCA
CAACGTTATTCGTGGATGGTCAGGCAATCACCACTTGGACTGGCGAAGTATCGCAGGAGAACAACATTCAGTTTGGTAAT
GCGGATGCCCAAATTGATGGCAGACTGCATGTGCAAAACATTGCTCTCACACAACAAGGCCAAAACCTCGTGGAGTTTGA
TGCTTTCTATTTGGCACAACAAACCCCTGAAGTAGAGAAAGACCTTGAAAAGCTTGGTTGGACAAAAATTAAAACGGGCA
ACACCATGAGTTTGTATGGGAATGCCAGTGTCAACCCAGGACCGGGTCATGGCATCACCCTTACTCGACAACAAAATATC
AGTGGCAGCCAAAACGGCCGCTTGATCTACCCAGCGATTGTGCTTGATCGTTTCTTCTTGAACGTCATGTCTATTTACAG
TGATGATGGCGGTTCAAACTGGCAAACCGGTTCAACACTCCCTATCCCTTTTCGCTGGAAGAGTTCGAGTATCCTAGAAA
CTCTCGAACCTAGTGAAGCTGATATGGTTGAGCTCCAAAACGGTGATCTACTCCTTACTGCACGCCTTGATTTTAACCAA
ATCGTTAATGGTGTGAACTATAGCCCACGCCAGCAATTTTTGAGTAAAGATGGTGGAATCACGTGGAGCCTACTTGAGGC
TAACAACGCTAACGTCTTTAGCAATATCAGTACTGGTACCGTTGATGCTTCTATTACTCGGTTTGAGCAAAGTGACGGTA
GCCATTTCTTACTCTTTACTAACCCACAAGGAAACCCTGCGGGGACAAATGGCAGGCAAAATCTAGGCTTATGGTTTAGC
TTCGATGAAGGGGTGACATGGAAAGGACCAATTCAACTTGTTAATGGTGCATCGGCATATTCTGATATTTATCAATTGGA
TTCGGAAAATGTGATTGTCATTGTTGAAACGGATAATTCAAATATGCGAATTCTTCGTCTGCCTATCACATTGCTAAAAC
AGAAGCTGACCTTATCGCAAAACTAA

Protein sequence :
MRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGWMQDNTNNGSGVLTNADGMPAWLVQGNGGRAQWTYS
LSTNQHAQASSFGWRMTTEMKVLSGGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTILATGTAATEYHKFELVF
LPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFRGPDRIPSIVASSVTPGVVTA
FAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPSTNTVLVSYARWPTDAAQNGD
RIKPWMPNGIFYSVYDVASGNWRAPIDVTDQVKERSFQIAGWGGSELYRRNTNLNSQQDWQSNAKIRIVDGAANQIQVAD
GGRKYVFTLSIDESGSLVANLNGVSDPIILQSERAKVHSFHDYELQYSALNRSTTLFVDGQAITTWTGEVSQENNIQFGN
ADAQIDGRLHVQNIALTQQGQNLVEFDAFYLAQQTPEVEKDLEKLGWTKIKTGNTMSLYGNASVNPGPGHGITLTRQQNI
SGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQ
IVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFS
FDEGVTWKGPIQLVNGASAYSDIYQLDSENVIVIVETDNSNMRILRLPITLLKQKLTLSQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nanH AAW31751.2 neuraminidase Not tested VPI-2 Protein 0.0 99
VC1784 NP_231419.1 neuraminidase Not tested VPI-2 Protein 0.0 98
nanH YP_001217324.1 neuraminidase Not tested VPI-2 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1545 YP_005634159.1 Sialidase VFG1117 Protein 0.0 98