Gene Information

Name : VCLMA_A1541 (VCLMA_A1541)
Accession : YP_005634155.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : TRAP-type transport system, periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1767744 - 1768709 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACCATTAATAAGATTACTATCGCAATACTTACTTTGAGTGCTGCTGCTTCTGTCAATGCTGCGACGACTTTAAA
GATGGGGATGCAAGCTTCTGTGGGGTCTGTAGAGTATAACTCGGCAAAAATGCTTGCCGACACATTAGAAGAAATGAGTC
AAGGAGAGATCAAACTCGCTTTGTACCCAAGCGCCCAGCTTGGTGATGATCGTGCCATGCTTCAGCAATTGACGCTGGGA
GATCTCGATATAACTTATGCTGAGTTTGGTCGTATGGGGCTTTGGATACCGCGAGCAGAAGCGGTCATGCTCCCTTATGT
CGCGAAAGATTTTGACCATTTACGCCGCATGTTTGAATCTGACTTTGGTCAAGGTGTTCGTGATGAAATGCTCCAGAAGT
TCAACTGGCGTGCTTTGGACACTTGGTATAACGGTACCCGTGAAACCACTTCAAACCGTCCCCTCAATTCGATTGAAGAT
TTTAAAGGGTTAAAACTTCGAGTCCCGAATGCTAAGCAAAACCTCAACTATGCAAAGCTGTCTGGTGCCTCGCCAACCCC
GATGTCATTCTCTGAAGTTTATTTAGCGCTGCAGACCAATGCCGTAGATGGGCAAGAAAACCCGTTACCAACAATTAAAA
CGATGAAGTTCTATGAAGTGCAAAAGAACTTAGCCATGACACATCATATCGTTAACGATCAAATGGTGATCATTTCTGAA
TCTACTTGGCAGAAGCTTTCTGATACGGATAAAGACATCATTCAGAAAGCCGTGCAGAAAGTGGGAGATGCTCATACACA
GACCGTTAAAACCCAAGAGGAAGAATTGGTGTCCTTCTTCAAGAGTGAAGGCATCAACGTGACTTATCCGGATCTGGGGC
CATTCCGAGAAGCGATGCAACCACTTTACAAGGAGTTTGACAGTAAGATCGGTCAGCCGATTGTGTCGAAATTGGCAGCA
ATGTAA

Protein sequence : 
MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLG
DLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIED
FKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEEELVSFFKSEGINVTYPDLGPFREAMQPLYKEFDSKIGQPIVSKLAA
M

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 3e-142 99
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 3e-142 99
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 1e-143 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1541 YP_005634155.1 TRAP-type transport system, periplasmic protein VFG1112 Protein 1e-142 99