Gene Information

Name : VCLMA_A1540 (VCLMA_A1540)
Accession : YP_005634154.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : TRAP-type transport system, small permeasetransporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1767172 - 1767681 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :
ATGTTACGTAAGATAATTAATAATATTGAAGAAATCATTACTGTGCCTCTAATGGCGGCCTTGCTTGCTGTTTTGACTTG
GCAAATTGGTACCCGTTGGCTTCTCAATGATCCTTCTTTGTGGAGTGAAGAGCTTGCCCGATTACTCTTCATGTATATGT
GTTTAGTGGGATGTGCTATCGCCATTAAACGAAGTTCTCACGTCAATATCACTTTTTTCTCTGACAAACTTCCTGAAAAG
GCGCGCTTGTCTTTAGTCCTATCGTTAGAGATTGCCGTGCTGGTTTCTATTGGTGCAATCATTGTGCTCGGCTATCAACA
TGCCCAGCGTAATGCATTCTTTGAATTGATCACATTAGGGATATCGAGTAGCTGGATGAATTATAGCTTACCTGTGGGTG
GCGTGTTTATGGTGTTTAGACAACTCGAAAAAATCTTTAACCTTATGAAGCTGCTACTGGGTGTTAGCTCATCTGCTTCA
TTAATTGATCAGCAAGTAACGGAGAGGTAG

Protein sequence :
MLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSDKLPEK
ARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITLGISSSWMNYSLPVGGVFMVFRQLEKIFNLMKLLLGVSSSAS
LIDQQVTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 2e-74 100
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 3e-74 100
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 3e-74 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1540 YP_005634154.1 TRAP-type transport system, small permeasetransporter VFG1111 Protein 8e-75 100