Gene Information

Name : VCLMA_A1538 (VCLMA_A1538)
Accession : YP_005634152.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1764946 - 1765842 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAATTAACAGGTTTGATTGCTGCTCCACATACGCCTTTCACAAAAGATAACAAGGTTAATTTTGCGGCGATTGA
CCAAATTGCTGAGCTTCTGATTGAACAAGGAGTGAAAGGTGCTTATGTCTGCGGAACGACAGGTGAGGGGATCCATTGCT
CTGTCGAAGAAAGAAAAGCCATTGCAGAACGTTGGGTGAAAGCCGTTGATGGGAAGTTAGATGTTATTTTACATACAGGC
GCTTTAAGTATTGTTGATACCATCAACTTGACAGAGCACGCTGAAACACTGGATATCTTTGCTACCTCCGCTATTGGCCC
ATGCTTTTTCAAACCGGGAAGTGTTGATGATTTAGTTGAGTATTGTGCTCAAGTTGCTGCCGCAGCTCCTTCAAAAGGTT
TTTATTACTACCACTCAGGAATGTCGGGTGTGAATCTGGATTTAGAGCAGTTCTTGATTAAAGGCGAACAGCGCATTCCT
AATCTTTATGGCGCAAAATTCAATCATGCTGATTTGTATGAATACCAGCGTTGCGTACGAGTATCGAATCGCAAATTTGA
TATTCCATTTGGTGTGGATGAGTTTTTACCTGCTGGTTTAGCCGTTGGTGCGATAGGCGCAGTTGGTAGCACTTATAACT
ATGCTGCTCCATTGTATTTGAAAATCATTGAAGCATTTAACCATGGTAAACATGATGAAGTCGCAGCGTTGATGGATAAA
GTGATTGCGATTATTCGAGTATTGGTCGAATACGGCGGTGTTGCGGCAGGTAAAGTTGCCATGCAGTTACATGGTATTGA
TGCTGGGGATCCCCGCTTACCTATTCGTTCATTGAATGACAAGCAGAAAGCGGATGTGCTTGCGAAGATGCGTGATGCTG
GGTTCCTGTCGATCTAA

Protein sequence : 
MKKLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERWVKAVDGKLDVILHTG
ALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIP
NLYGAKFNHADLYEYQRCVRVSNRKFDIPFGVDEFLPAGLAVGAIGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDK
VIAIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAGFLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-132 99
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 2e-132 99
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 3e-131 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1538 YP_005634152.1 N-acetylneuraminate lyase VFG1109 Protein 8e-133 99