Gene Information

Name : VCLMA_A1537 (VCLMA_A1537)
Accession : YP_005634151.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : Sialic acid utilization regulator, RpiR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1763981 - 1764817 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence : 
GTGAATTTGCCTAAAAATCTGATGGTTCGATTGCGCTCGAATACCGAACCTTTGAGCAAAAAACTCAGAGTTGTTGCTGA
TTATGTGCTCGAAAATGCACATGAAGTTCAGTATCAGACGATCACCGATCTAGCGTTTAATACAAAGACAAGCGAAGCCA
CTGTAGTCAGGCTATGCCGTGATTTGGGCTACAAAGGTTATTCGGATTTTAGAATGGCATTGGCGGTTGATCTTAGTCAG
TCTGCAAACCAATCTCAGCCCAAAATGGATGGCGATATTTGCGAAGTTTCTGCGCAAAGCGCGGTAGATAGTTTAATGGA
TACTGCAAAACTGATAGACAGAGCTGCCTTAAATAGAATATGTGAGTTGGTTCATGGCGCTAAGTTTATTGGGTGTGTTG
GTGTGGGAGCATCCAGTATCGTCGGTCGCTATTTGGCGTACCGATTAGTGAGAATAGGTAAAAAAGCCATCATGTATGAA
GATACACACTTGGCGGCAATGAGTGCTGGACAGAGTGTTGTCGGGGATGCATGGTTTGCAATATCGAGCTCAGGGTCTAC
AAAAGAGGTGGTTCATGCGGTCACCCAGGCTCATCAACGCGGTGTGCCAGTTGTATCTCTTACGAATATTAGCCATAGCC
CACTTTCTTCGATTTCAGATGAAATGTTAGTGGCTGCAAGGCCTGAGGGCCCTCTCACTGGCGGTGCTTTTTCTTCTAAA
GTTGGTGCTTTATTGCTTGTTGATGTTTTGATTAACACACTTTTAGATGTATATCCTGAATATTCAGCCTCCGTATTTGG
TACTGCGGAAGTGGTTTTACCTTTAATGGATAGTTAA

Protein sequence : 
MNLPKNLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVDLSQ
SANQSQPKMDGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYE
DTHLAAMSAGQSVVGDAWFAISSSGSTKEVVHAVTQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSK
VGALLLVDVLINTLLDVYPEYSASVFGTAEVVLPLMDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 3e-119 99
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 3e-119 99
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 2e-119 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1537 YP_005634151.1 Sialic acid utilization regulator, RpiR family VFG1108 Protein 1e-119 99