Gene Information

Name : VCLMA_A1534 (VCLMA_A1534)
Accession : YP_005634148.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Unknown
Product : Phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1760299 - 1761567 bp
Length : 1269 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAATAATCTAACCGCAAGGCAAATTCAAACCGCAAAACCTAAGGATAAGCTTTATCGTTTATCTGATGGCGGCAA
TCTCTACTTTTGCGTACGTCCAAGTAATTCTCGCTCATGGCAATTCCGTTATAAACGACCAGGACAAGATAAGATTACTT
ATCTTTCATTTGGTACCTATCCCGATATGTCTTTGGCGGAAGCTCGAGAGAAAGCCCTTGAGGCTCGCAAGCAGTTAGCG
GATGGTATTGACCCTCAACTCGCTAAAGAAGAACAAAAAGCAAAAACCATTACTGAACAAAATGCGACGTTCAAGTTTGT
CGCTGAGCAATGGAAGGCTACAAAGGAAGGGCAAATAAAAGAGAAGACACTGGAAGGGAATTGGCGAAAACTTGAACTTT
ATGCCTTTCCCAAATTGGGCTCGATACCCGTTAGTAAACTTACTGCGCCGATTGCCATCGCTGCATTAAGGCCAATAGAG
TCTCAAGGATTACTAGAAACTGTAAAACGCACCGCCCAACTTATGAATGAAATCATGAACTATGCGGTAAATAGCGGTGT
CATTCATGCTAACCCATTAGCTGGCATCCGTGATGTGTTTAAAAAACACAAAGTGGTGCACATGAAAGCCCTGCAACCAC
ATGAAATGCATGATCTTATACGCACCGTTGCTACAGCAAATATCCAGCATGTGACACGATTTTTAATTGAATGGCAACTT
CACACCATGGTTCGGCCTAACGAAGCCTCTGGTGCTCGTTGGGAAGAAATCGACATGGTTAATAAGCTTTGGATTATCCC
TAAAGAGCGAATGAAGATGAACCGTGAGCACATAGTCCCACTGACAGCACAAACATTGGCTATTCTTGAAGCAATTAAGC
CTATCAGTGGTCATAGAGAGTTCATTTTCCCATCTAGCCGTAATCCAAAGGTACCCACCGATTCTGAAACCGCTAATAAA
GCACTTAGCAGAATGGGATTTAAGGATAGAACGACCGCGCACGGTCTTCGTGCTTTGGCAAGTACCACTCTTAATGAACA
GGGCTTTGAACCTGATGTCATTGAAGCCGCATTGGCTCATACTGACAAAAACCAAATACGCAAAGCATACAACCGCACCG
ACTATTTAGACTCTCGTCGAAAGCTTATGAGCTGGTGGAGTGAGCATATCGAAAAATCTAGCTATGGAAGCTACAGTGTC
GCTTCGCTAAGTGCTCAATTATCTCCCAAACTACCTGTAAGAATAACTTATAGTTTATTTAAGAATTAA

Protein sequence : 
MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKQLA
DGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPIAIAALRPIE
SQGLLETVKRTAQLMNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHIVPLTAQTLAILEAIKPISGHREFIFPSSRNPKVPTDSETANK
ALSRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSV
ASLSAQLSPKLPVRITYSLFKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 8e-178 99
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-177 99
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-177 99
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 7e-100 54
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 7e-100 54
int AAK20773.1 integrase Not tested VPI Protein 5e-100 54
int AAK20803.1 integrase Not tested VPI Protein 5e-100 54
unnamed AAA82714.1 integrase Not tested VPI Protein 5e-100 54
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-91 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1534 YP_005634148.1 Phage integrase VFG1092 Protein 4e-178 99