Gene Information

Name : VCLMA_B0564 (VCLMA_B0564)
Accession : YP_005632439.1
Strain :
Genome accession: NC_017269
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 615013 - 615690 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAACATCCATCATTTCAGCGCAATCACTATCCAAATTAGTCTCCACTAATCAGGAGCATTTAACAATCCTTAAACA
GGTGAATCTCTCGATTCAAGCGGGAGAAAGTGTGGCGATTGTCGGCGCATCAGGCGCGGGAAAATCGACGCTGATGACGC
TACTGGCGGGGTTAGATACGCCAAGTGAAGGGGAAGTGTATCTGTTGGGGAAACCGCTTTCACAACTGGATGATGAAGCC
CGCGCCGCACTGCGCAGTGAATCCGTTGGGTTTGTGTTCCAAAGTTTTCTGCTTATTCCGAGCCTGTCGGCGCTGGAAAA
TGTCACTCTGCCTTGTTTGTTAAAAGGCGAAGCGGAGGATCGCGAACGTGCCCAGAAGCTGCTCAAAGCGGTCGGTTTGG
AGCATCGAATGCACCATTCGCCCGCACAATTGTCGGGTGGTGAGCAGCAACGCGTAGCGATTGCTCGCGCATTTATGATA
AGCCCCCAAGTGCTTTTTGCTGATGAACCAACGGGCAATTTGGATCAAGAAACGGCCGCAAAAGTGATTGATTTACTGTT
TGAACTGAACCGTGAACACGGCACCACACTGGTGTTGGTGACGCATGACCCTAAACTCGCGCAGCGTTGTCAGCGACGAT
TTTTTATGCAAGCGGGTGAGCTGGAGGAGCGCGTATGA

Protein sequence : 
MQTSIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEGEVYLLGKPLSQLDDEA
RAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEAEDRERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMI
SPQVLFADEPTGNLDQETAAKVIDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELEERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-39 47
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-40 45
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-36 43
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-37 41
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_B0564 YP_005632439.1 ABC transporter ATP-binding protein VFG2059 Protein 8e-20 42