Gene Information

Name : VCLMA_B0436 (VCLMA_B0436)
Accession : YP_005632314.1
Strain :
Genome accession: NC_017269
Putative virulence/resistance : Unknown
Product : hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 472945 - 474690 bp
Length : 1746 bp
Strand : -
Note : -

DNA sequence :
ATGATGCAAACCCAGCCATTTCGATTGCCGCGCTTCACCCCATTTGGGGTGATAGAAAAGGGGGTAGAGTTAGCGACAGG
TCTTAGTCAGCTAGAGCGCTACTACCAGCAAAGACCAACCACGCGTGATGGTTTTGAGTTTATGCGTTACACCCTTGAAG
CGCTCAATGTGCATTACCAAGTGGATAGAGGCCGTGTTGAACAGATCCCCACACAAGGGCCGGTGGTGATCGTAGCTAAC
CATCCGCTTGGTGCCATCGAAGGGGTGATTTTGGCCGATTTGGTTGGGCAAGTACGCAAAGATGTGAAAGTGCTCGCCAA
TCAACTGCTTAAACGTTTACCAGAAATTGAACCACTGTTCATTGGTGTGGATGTGTTTAATGGCGCAGAGGCGAGTAAAA
CCAATGCACGAGGTATTCGAGAAGCACACCGGCATTTAGCGGAAGGTGGTGTACTGATCGTATTTCCCGCCGGTGAAGTC
TCGACACCGCAAAAAGAAACCGGACAGTTGAGTGATATCGACTGGAGTCAATCCGTTGCAAAATTCATTCAGCGTAGTCA
GGCGACGTGCGTGCCGATTTACATTCATGGTCGTAACAGCGCGTGGTTTTATCGTGCTGGAAAAATTCATCCGCTCTTGC
GCACCGCCATGTTAGGTCGAGAGCTTTTGAATAAAAGCGCGAGCACCATTTCCCTTTGCATTGGTCAGCCGATTCCTTAT
GCGGAATTAAAAGAGTTCACCAAAGATGAAGATGTGGTCAATTACTTGCGGCTCAATACCTATTTGATGAGCCCGTATGA
CCAAGCTGAACCGGCAAAAGACTCTTTTACGATTCCGGTGATTGAGCCTGTACCTAAAGCAGCTCTCATCGCAGAGCTTG
CTCAATTAGATAAGCAAGCCAAGTTATTGGAGCAGGGCGAATTCACTGTGTACTGCGTACCTTCAACCCACATTCCCTGC
ATGATGCAAGAAATTGGTCGTGTGCGTGAAATCAGTTTCCGCGCGGTTGGGGAAGGCAGCGGGCAGGCTTGCGATGTGGA
TGCGTATGATCACCATTATTGGCAACTGTTCGTTTGGAATCGAGAGCAGAGCGAGCTGGTTGGTGCGTATCGCATGGGCT
TGGTCGATAAAATTGTCGCAGAAAGAGGGCTGCAAGGCCTCTATTCCCGTAGCTTGTTTCATTACGATCACGCATTTTTG
GCGACCTTAGAGAATGCGATTGAGCTTGGTCGCTCAGTGGTGGCTGAACAGTATCAACGTAATCTCAACTCATTGCTTTT
ACTCTGGAAAAGCATTGCGCGCTTCGTAGAGCTAAACCCACATTACACCCATTTGTTTGGCCCGGTCAGTATCAGCAACG
ATTACAGCCCAGCGGCTCGACAACTGATGGCCGCGACCTTATCCATCCATCACTATGATCAACATAAAGCGGCCTTGGTC
AGTCCATCAACCCCTTTGCGTGCCGGAACAGAAGTGTTTTGGCAAAAAAGCTTATTATCGGCACTCGCCAGTGTCTCTTT
GCTCTCTAAAGTGGTTGCACGTATGGAGCAGGGCAACGAGCTGCCTGTGTTGCTGCGCCAATACCTCGGCATGAATGGCA
AGTTAGTCTGTTTTAATGTTGACCCAGCCTTCAACGATGCGTTGGATGGTTTAATTGTGGTGAATTTGAAGCAAGTCCCA
CTGAAAACGTTGGCTAAATACATGGGTAAAGAGGCGGCGCAGCATTACCTTTGCTCAGTGACGTAG

Protein sequence :
MMQTQPFRLPRFTPFGVIEKGVELATGLSQLERYYQQRPTTRDGFEFMRYTLEALNVHYQVDRGRVEQIPTQGPVVIVAN
HPLGAIEGVILADLVGQVRKDVKVLANQLLKRLPEIEPLFIGVDVFNGAEASKTNARGIREAHRHLAEGGVLIVFPAGEV
STPQKETGQLSDIDWSQSVAKFIQRSQATCVPIYIHGRNSAWFYRAGKIHPLLRTAMLGRELLNKSASTISLCIGQPIPY
AELKEFTKDEDVVNYLRLNTYLMSPYDQAEPAKDSFTIPVIEPVPKAALIAELAQLDKQAKLLEQGEFTVYCVPSTHIPC
MMQEIGRVREISFRAVGEGSGQACDVDAYDHHYWQLFVWNREQSELVGAYRMGLVDKIVAERGLQGLYSRSLFHYDHAFL
ATLENAIELGRSVVAEQYQRNLNSLLLLWKSIARFVELNPHYTHLFGPVSISNDYSPAARQLMAATLSIHHYDQHKAALV
SPSTPLRAGTEVFWQKSLLSALASVSLLSKVVARMEQGNELPVLLRQYLGMNGKLVCFNVDPAFNDALDGLIVVNLKQVP
LKTLAKYMGKEAAQHYLCSVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 2e-158 55