Gene Information

Name : kdpB (XOC_0823)
Accession : YP_005627196.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 823255 - 825303 bp
Length : 2049 bp
Strand : +
Note : -

DNA sequence :
ATGTCTACGATCGATACGACTGAAAAACGCGAGCGCGGTGACGCAGCGTTGTTCGATGCCGCTGTACTGGTTGCAGCGAT
GCGTGCTGCCTTCGGCAAGTTGGCACCGCGGCATCTGTTGCGCAGCCCGGTGATGGCGGTGGTGATGGGCGGCACGGTGC
TGGCAGCGGTGATCACCGCCAGCGGGCATGCGCATGCCGGCTTCGGCTGGGCGGTGACGGCGATTTTGTTCGTCACCGTG
TTGTTCGGCAATTTTGCCGAAGCCATTGCCGAGGCACGTGGCCGCGGCCAGGCCGCCTCGTTGCGGCGGGCGCGCAAGGA
CCTGGTGGCACGCCGGGTGGAAACCGCTCTGGGTGGCCGCGAAACCCGCGTGCCGGCGGCAGAACTGCGCCCGGGCGATT
ACGTCATGGTGTCCGAAGGTGAATTCGTACCGGCCGATGGCGAGATCGTGCGTGGTGTTGCCACCATCAACGAAGCAGCG
GTGACCGGTGAATCGGCACCGGTGTTGCGCGAGGCCGGCACCGACCGCAGCGGCGTCATCGGTGGCACGCGCGTGCTCTC
CGATGAGATCGTGTTCAAGGTCACCGCCGAGCCGGGGCACAGCTTTCTTGATCGCATGATCGCGTTGGTGGAAGGCGCCA
ATCGGCAGAAGACGCCGAACGAGATCGCGCTGACCTTGTTGCTGGCCGCGATGACGCTGACGTTTTTGATCGTGGTGGCG
TCGTTGCCGGCGATTGCGGGCTTTGTCGGCGTCACGCTGGATCCGCTGCTGCTGATCGCGTTGCTGGTGTGCCTGATCCC
GACCACCATCGGCGGGCTGTTGCCGGCAATTGGTATCGCCGGTATGAACCGGGCGCTGTCGGCCAATGTGTTGGCCAAAT
CCGGCAAGGCAGTGGAAGTGGCCGGCGACGTGGATGTGCTGCTGCTCGACAAGACCGGCACCATCACCTATGGCGACCGC
CAGGCCACCGCATTCCATCCCCTGGCTGGCGTCGACCGCGCACAACTGCGCGATGCGGCCATGCTTGCCTCGCTGGCCGA
TCCGACGCCGGAAGGGAAATCCATCGTCAAGCTGGCGCGTCAGCAAGGTGCCGTCGCAGTGGAGGCCGAGGGTGCGCATT
TCGTCGCGTTCACCGCACAGACGCGCATGTCCGGTGTCGATCTTGGAGGGCGCAGCATCCGCAAGGGCGCCGGCGATTCG
ATCGTGGCGTATGTGCAGGGCATGGGCGCCACGGTGTCGCCCGAATTGCAGGGCCGTATCGAAGAAGTGGCGCGTGGCGG
CGCCACACCGTTGGTGGTGGCCGAAGGCCGCCATGTGCTCGGTGTGGTGGAGTTGAGCGACGTGGTCAAGCAGGGCATCA
AGGAAAAGTTCGCGCAGTTGCGTGCGATGGGCATCAAGACGGTGATGATCACCGGCGACAACCCGCTCACCGCTGCCGCG
ATTGCTGCCGAAGCCGGTGTGGACGACTACATCGCCCAGGCACGTCCGGAAGACAAGCTGGCACGCATCCGGGCCGAGCA
GACGGGCGGGCGGTTGGTGGCGATGGTCGGCGACGGCACCAACGACGCACCGGCGCTTGCGCAGGCCGACGTGGGTCTGG
CGATGAACTCCGGCACGCAAGCCGCCAAGGAAGCCGGCAACATGGTGGATCTGGATTCAGATCCGGCCAAGCTGCTGGCG
GTGGTGGAAGTGGGCAAACAGCAGTTGATTACGCGCGGTGCGTTGACCACGTTCTCGCTGGCCAACGACGTTTCCAAATA
CTTCGCGATCCTGCCGGCGCTGTTTGCTGCCGCCATCCCGTCGATGACAGCGCTCAACGTGATGCAGCTCTCCAGCCCGC
GCCATGCGGTATTGGCGGCGTTGATCTTCAATGCGTTGATCATTCCGGCATTGATTCCGCTGGCATTGCGCGGCGTCCGT
TTTCGTCCTTCCAGCGCCACCGCGCTGTTGCGCCGAAACATGCTGATCTACGGCGTGGGTGGCGTGTTGCTGCCGTTCGT
TGCGATCAAAGTGATCGATCTGGTGCTGGTCGCCGTCTTCGGTGCCTGA

Protein sequence :
MSTIDTTEKRERGDAALFDAAVLVAAMRAAFGKLAPRHLLRSPVMAVVMGGTVLAAVITASGHAHAGFGWAVTAILFVTV
LFGNFAEAIAEARGRGQAASLRRARKDLVARRVETALGGRETRVPAAELRPGDYVMVSEGEFVPADGEIVRGVATINEAA
VTGESAPVLREAGTDRSGVIGGTRVLSDEIVFKVTAEPGHSFLDRMIALVEGANRQKTPNEIALTLLLAAMTLTFLIVVA
SLPAIAGFVGVTLDPLLLIALLVCLIPTTIGGLLPAIGIAGMNRALSANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDR
QATAFHPLAGVDRAQLRDAAMLASLADPTPEGKSIVKLARQQGAVAVEAEGAHFVAFTAQTRMSGVDLGGRSIRKGAGDS
IVAYVQGMGATVSPELQGRIEEVARGGATPLVVAEGRHVLGVVELSDVVKQGIKEKFAQLRAMGIKTVMITGDNPLTAAA
IAAEAGVDDYIAQARPEDKLARIRAEQTGGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPAKLLA
VVEVGKQQLITRGALTTFSLANDVSKYFAILPALFAAAIPSMTALNVMQLSSPRHAVLAALIFNALIIPALIPLALRGVR
FRPSSATALLRRNMLIYGVGGVLLPFVAIKVIDLVLVAVFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-128 54
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 5e-128 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-126 53
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 53
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 53
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 9e-126 53