Gene Information

Name : ribD (XOC_0811)
Accession : YP_005627184.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 811042 - 812151 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAGACCGCGGCGATCGCGAGTGCCGATGACCACCGCTGGATGGCGCAGGCGTTGCGCTTGGCCGAGCGCGGCGC
CTACACCACCCGCCCCAATCCGATGGTGGGCTGCGTGATCGTGCGCGATGGCGTGTGCGTGGGCGAAGGCTTTCATCAAC
GTGCGGGTGGCCCGCATGCCGAAGTCTTCGCGTTGCGTGCGGCCGGTGAGTTGGCGCGCGGTGCCACTGCGTATGTGACC
CTGGAGCCATGCGCGCATTACGGGCGCACGCCGCCGTGTGCGTTGGCGTTGATCGAGGCAGGCGTAACGCGTGTGGTCGC
GGCGATGGCCGATCCGTTTCCGCAGGTCAATGGCGGTGGTTTCGCGTTGCTGCGCGACGCTGGAATCGAGGTGCTCAGCG
GGGTGATGCACGCGCAGGCGCGCACGCTCAATCAGGGCTTTCTGTCGCGGGTGGAGCGTGGCCGGCCGTGGCTGCGGGTC
AAACTGGGCGCCAGCCTTGACGGGCGGACCGCGTTGGCCAGCGGCCAATCCAAATGGATCACCGGAGCCGACGCGCGTGC
GGACGTGCAGCGTTGGCGTGCGCGTGCCGGCGCAATTCTCACTGGTGCTGGCACGGTGTTGGCCGACGATCCGTCGATGA
CGGTGCGGCTGGGCGATGACACCGCGTGCGTGCCACCGCTGCGTGTGGTGCTGGATGCCGGCTTACGCACGTTGGCGTGC
AAGAACATCCGCAATGGCGATGCGCCGACGCTGTATCTGCATGGCGATGCTGTCGCTGCAACCGCGCTGGATGGTGCGGC
ATATGCGGCACTGCCGTTGCACGTGGGCCGTTTCGATCTGTCCGCAGTGCTGGCGTTGCTGGCCGAGCGCGACATCAATG
AAGTGCATGTTGAAGCCGGCGCCACGCTGAGCGGTGCGCTGTTGCAGGCCGGGCTGGTGGACGAACTGCTGGTCTACATG
GCGCCGGTGTTGCTGGGCGACACCGCAAGGCCCTTGCTCGCTGGCCTTGGCATCGAAACGATGGCCCAGCGCTACGAATT
GCAACTACGCGATGTACGTCAGCTCGGGCAGGATCTGCGTTTGCATTACGCGCCATCGGCGGTGGTATGA

Protein sequence :
MSETAAIASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGELARGATAYVT
LEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVLSGVMHAQARTLNQGFLSRVERGRPWLRV
KLGASLDGRTALASGQSKWITGADARADVQRWRARAGAILTGAGTVLADDPSMTVRLGDDTACVPPLRVVLDAGLRTLAC
KNIRNGDAPTLYLHGDAVAATALDGAAYAALPLHVGRFDLSAVLALLAERDINEVHVEAGATLSGALLQAGLVDELLVYM
APVLLGDTARPLLAGLGIETMAQRYELQLRDVRQLGQDLRLHYAPSAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-61 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-61 51