Gene Information

Name : XOC_0529 (XOC_0529)
Accession : YP_005626911.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 530776 - 531321 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence :
GTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCG
CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGAGGTGGAAC
GCGCCATCTCCGGCCACGGCGTTGCGCGCGTGCTGGATCGGTTGGCACACAGTCGCGGCCTGCCGCAGGTAATCCGCACG
GACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCGACGCCAGATCCAGCC
TGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCGACGCGACGAATGCCTCAACGAACATTGGTTCC
CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGC
GCAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAGCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MPVGERAPLLRPTKANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIEVERAISGHGVARVLDRLAHSRGLPQVIRT
DNGKEFCGKAMVAWAHANRVQRRQIQPGKPNQNAYVESFNGRRRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG
AMTPAAYAQQLANSDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-42 58
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 4e-33 53
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 5e-32 53