Gene Information

Name : XOC_0487 (XOC_0487)
Accession : YP_005626874.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : ISXo1 transposase, IS5 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 486309 - 487250 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCTGACGTTCGGTGACGCTGGGGATCTGGGCAAGCGCAAGCAGACCCGGCGCGAGATTTTCCTGGCCGAGATGGA
GCAGGTGGTTCCCTGGCAGCAACTGCGCGTGCTGATCGCGCTGCACTCTCCGGTGTCGGGGCGGCCAGGGCGGCAGCCAT
ACGCCCTGGCGACGATGTGGCGGATTCATCTGCTGCAGCAGTGGTATGCGTTGAGCGATCCGGCAATGGAAGAAGTGCTG
CACGAGATACCGACATTGCGGCGTGTTGCCCAGCTCGGCGGCTTGGACGACATTCCCGACGAGCCCACGATTCTCAACGT
TCGACGCCTGCTGGAGACCCATGATCTTGCCGCGCGGATGCTGGAAGCGGTCAACGCGCATCTGGCGCGCAAGGGCCAGA
GCCTGCGGTCCGGCACGATTGTCGATGCGAGGCTGATCGCTGCGCCCAGTTCGACCAAGAGCGCCCATCACGCGCGCGAG
ACTGAGATGCATCAGACCAGGAAGCGCAATCAGTGGTATTTCGGGATGAAGGCGCACATCGGCGTGGATGCGTTTTCCGG
GCGGGCGCACCATGTCCATGGCACAGCAGCCGATGTCACGGTGGCGCACACCTTGCTGCATGGCAAAGAAGACCGCGTGT
TCGGCGACAGCGGCTATACCGGCGCAGAAAAACGCGACGAACTGCGGGACTGCAAAGCAGCATTCTTCATCGCCGCCAGG
CCCTCGACGATCCAAGCCATCGGCAACAACCGCGAGCGTGCTCGGGAACAGCGTTGGGAACACGTCAAGGCCAGCGTGTG
CGCAAAGGTGGAGCATCCATTCCGGGTGATCAAGCGCCGGTTCGGCTACACCAAGGTCCGCTATCGCGGACTGGCCAAGA
ACACGGCACACGTGCTGAGCTTGTTTGCGCTGTCAACCCTGTGGATGAAGCGAAAGCAGTGA

Protein sequence :
MQLTFGDAGDLGKRKQTRREIFLAEMEQVVPWQQLRVLIALHSPVSGRPGRQPYALATMWRIHLLQQWYALSDPAMEEVL
HEIPTLRRVAQLGGLDDIPDEPTILNVRRLLETHDLAARMLEAVNAHLARKGQSLRSGTIVDARLIAAPSSTKSAHHARE
TEMHQTRKRNQWYFGMKAHIGVDAFSGRAHHVHGTAADVTVAHTLLHGKEDRVFGDSGYTGAEKRDELRDCKAAFFIAAR
PSTIQAIGNNRERAREQRWEHVKASVCAKVEHPFRVIKRRFGYTKVRYRGLAKNTAHVLSLFALSTLWMKRKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-75 58
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 7e-59 57
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 5e-59 57
unnamed AAO33449.1 putative transposase Not tested Not named Protein 7e-46 50
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 1e-51 45
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 1e-51 45