Gene Information

Name : xopAE (XOC_4459)
Accession : YP_005630691.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III effector protein XopAE (HpaF)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4592189 - 4594129 bp
Length : 1941 bp
Strand : +
Note : -

DNA sequence :
ATGTTCAATATAAATCGCCTACTGCGCTCTCGCCCGCAAACGGACAACGCCGATCAAGCGCCCGCGCAAGACAGGCCTTC
ACGGCAACCTTCACCCGCACAGGGCTTGCTGAGTCCTCTGCTCGCGCGGCCGCGACGGCGCGAAAGCAGATCACCGGCAG
ACACGTCGACGCCCGGAAATGCGGCGCAAGGGCGCTTTTCCCGATCGCCTTTGCATCCGTTGAGTCAGCCGGCGGCACGC
GCGGGCGCCTCTTCTGCACCAACGCGCAGCATCGAGCACGACATCGACGATTGGCTTGCGCAAAGCCTGCCGATGGCAGA
ACGGATCCCAACGGGCTACAACCTGCACGACGGGTCGAGAGATACGTCGCGGGATGTACTGCAAAACGCCGCAGAAGCAA
TCCGCCGTGCAGCGACCCGCCGCCGCACCGAACTTCTTGTCGACGGCCTCCCTGCCACGAGGCTACCTGAGTCGATCGGC
CGGCTCGACGCGCTACAGAAATTGATGCTGCTCCATACCGGGGTTCAGTCGCTGCCGGACAGCCTGGGACAGCTGAGCCA
GCTCCGCCATTTGCAGATCGGTGTCGCGCCGGAGCTGAAAACGCTGCCACCCTCGTTGACGCGCCTGTCCAATCTCAGCA
CCCTTCAATTGACGATGATCCCCTTGGACGAATTGCCCGCGGACCTTGGGCGCATGCAGGGTCTGCGCAGCCTCGCGCTA
GGTGGCGGGCACTATGCGCGTCTGCCGGCCAGCATCGTTGAACTGAGCCGGTTGACCGGGTTGCGCGTGTCGCACTCGTC
GCATTTTCGCGAGTTACCTGAAAACATCGGCCTCATGCAGGGGCTCAGGTCACTGGAGTTGGCATCGAATTCCAAGCTGG
AGCAGCTTCCAGGCAGCCTCACGCAGCTGCATCGGCTGAAGAAACTCGACCTGTCGTCCAACCGCCGGCTGGCGCACTTG
CCTGAGGACATCGGTCAACTGCGCGGCTTGACGGAACTGTCGCTGAAAAGTTGCGCTGCGCTGCGACAGCTGCCCGACAG
CGTGGGGGATCTGGCCCAGCTGCAACTGCTGGACCTGCGCGGCACTGGCCTGCAGACCCTTCCACCGTGGCTGGCACGAC
TGCCCGCTCGCTGCGACATTAAGGTGCCGGATCATCTGGCAGACCAATTGCTGCAGATCCGCGACCCGGAACGCGCGCAG
CGCGCGGCACAGCGGCTGGCCGACAGGAGACGACACGCGCCCGTGCCGGCGGCGCAACAGGCCGGGGCGTCGTGGAACCG
CGTCCCCGAGTTCACGCGCGTGTTGCGCAGTGTCGATGCCGACCTGGGCGAGCGTTTTGAGAAGTGGACGCACGGCCTGA
CGCAAAATGGCAGGGTCTTCGGCGCATCCATCACATCGGCCGACATGCCCCTGCTGGACCAGGTGGTGGCCGAGGCCATT
CGATCACCCGAATTCCGCAGCACCTTCGGCCAATTCTTGAACGACCACACCGTCAAGACGCTCAACATGGATGGCATGAC
GCAAGTGGGTGATGGCGGGCCCCGTGTGCGAGGAGACGTCAAAACCGCGTTTGCCGAGATGCTCAAGCACAACATCATGC
ACACGCAGGACCAGGAGACCGCACTGGGCCTGCTGCAGCAAGCCCTGCAAAATTCCGGCCTGGGGCTGTCCAGGGAGATG
CTGCTGCGCAGCAGGAATCAACTCACCGGGCGTGCGGAAATGTGGCCGCCACTGAAGGCCTACATCTCCATGCACGACGT
GGAGGGAAAAGCGGCGCAGGATGCGGCGATCACGTGGGCGATGGCTCAGCTTGACGAAGCGCATGAGGGTGTCATCGGGG
AAGCAGAGGCCAAGCAGGAGTCCGAACAGGCGCAGGCCAACGCGAACCACTTCATCGAGCGGCGGGCGCATGTACTGCTC
CGGGAATGGGGCATCCATTAG

Protein sequence :
MFNINRLLRSRPQTDNADQAPAQDRPSRQPSPAQGLLSPLLARPRRRESRSPADTSTPGNAAQGRFSRSPLHPLSQPAAR
AGASSAPTRSIEHDIDDWLAQSLPMAERIPTGYNLHDGSRDTSRDVLQNAAEAIRRAATRRRTELLVDGLPATRLPESIG
RLDALQKLMLLHTGVQSLPDSLGQLSQLRHLQIGVAPELKTLPPSLTRLSNLSTLQLTMIPLDELPADLGRMQGLRSLAL
GGGHYARLPASIVELSRLTGLRVSHSSHFRELPENIGLMQGLRSLELASNSKLEQLPGSLTQLHRLKKLDLSSNRRLAHL
PEDIGQLRGLTELSLKSCAALRQLPDSVGDLAQLQLLDLRGTGLQTLPPWLARLPARCDIKVPDHLADQLLQIRDPERAQ
RAAQRLADRRRHAPVPAAQQAGASWNRVPEFTRVLRSVDADLGERFEKWTHGLTQNGRVFGASITSADMPLLDQVVAEAI
RSPEFRSTFGQFLNDHTVKTLNMDGMTQVGDGGPRVRGDVKTAFAEMLKHNIMHTQDQETALGLLQQALQNSGLGLSREM
LLRSRNQLTGRAEMWPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGEAEAKQESEQAQANANHFIERRAHVLL
REWGIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF YP_198704.6 protein HpaF Virulence Hrp PAI Protein 0.0 96
hpaF BAB63151.1 hrp-associated protein Virulence Hrp PAI Protein 0.0 96
hpaF NP_640748.2 HpaF protein Virulence Hrp PAI Protein 0.0 83
hpaF AAP34359.1 HpaF Virulence Hrp PAI Protein 0.0 82