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Name : hrpF (XOC_4457) Accession : YP_005630689.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Virulence Product : type III secretion translocon protein HrpF Function : - COG functional category : - COG ID : - EC number : - Position : 4589216 - 4591624 bp Length : 2409 bp Strand : + Note : - DNA sequence : ATGTCGCTCAACATGCTTTCTACCGGGAGCAACCCCAGCCAACTGCTGGGCACCTCTTCCAACGAGTCGTCTTCATCGGA TCTGTTCGGGTCGGATTCGTCCAGGGATGGCTTCGACCTGCCATCGACGATGGATACCCTCTTTCAGCAAATCTACCTAG TGCTGGCGGCTCTCCAGGCCAACACGCAAACCGGTGCATCCGGTGATACGCCGGCCAATACGGCAAGCGGCGATGCCGAC ACACAGATGTCCGCATCGGACTGGCAGGCCACCCAGCCGATCGAAAAGCGCACCTCCTGGCCATCCCTGGACTACGACTT CGATCCCAAGAACATCAAGGGGAAGGATGCGCCGCCGGCGCTGGAGGGGTCGACGGTTACCTGGAACGATGGCACGCTGA CCAAGTCGGAGCTTCAGATCGTTTCGACGCTGAATGCACACAAGGATCAGATGCCGCTCGAGTACAAGAATCTCGACGAC AAGATCAACGACCCTTCCACGCCCCCCGACCTGAAGGCTGCATTGCAGGGCCTGAAACAGGACCCGCGATTGTTCTTTGC GATCGGTTCTCAGGGAGACGGCAAGTGCGGCGGCAAGGTCAGCGCGCAGGATCTGTGGGATTTCTCTGATTCGCATCCGC AGGTCAAGGACCTGGGCGGAAAGAACGACGAGTTCAATCCCAAGGACATCAAGGGGTCCAACCCGCCACAGGCGGCGGAG GGCTCGACGGTAACCTGGAACGACGGCCAGCTCAATCAATCCGAACTGGAGATTGTTTCGGTTCTGGATCGGCACAAGGA CCAGGTCGACTCGCTGTCCTTCGATCAGCTGGATGCCAAGATCAACGATCCGTCGACGCAGCCTGACTTGAAGGAAGCGC TGAAAGGATTGCAGAAGGATCCGCGGTTGTTCTTCGCCATCGGCTCGCAGAAGGACGGCAAGTGCGGCGGCAAGATCAAG GCGCAGGACCTCACAGACTTCTCGTACTACCATCCGCAGATTGCCGAATACAACGACAAGAAGGCAAAGAGCTACACGCA GAACTACATCGCATCCGATAGCCCCGACAAAACCAAGGCGTCGGTCATGACCAAAAGCGATGCCCTGCGCGAGATGTATC GCTATTCCGACTATCTGCCCGGCAACCTGAGCGAGGACGAATTCGCCAAGATCGTCGACGGCGACAGCAAGACCGGCAAG TGCCCACCGCAGTTGATCGCGGCTGCTCAATATTTTCGCGATCATCCGGACGAGTGGAAGGAATTTTCAGGAGACGCCGG CACGATGAGCACGCCGGACTTCCTGCAGAAGTCCACCTCCGAGATGCACCTGACCGCGGACGAGCAGAAGACGCTGGACA CCATCAACAGTCATCAGGACGCGTTCTACGGCGACGGTAAGGAACTCACGCGCGACAAGCTCGACGCGATCTCCAAGGAC GACAAGGCCGACCCGGCGGTCAAAGAGGCCGCAACGCAGTTGGCGTCCGATCCGCTGCTGTTCGGCTTGTTGAACAACTC GATCACCGGCTACAAGAAGCCCCATCACTTCTTCGGCGGCGGCCATGTCGTCGATTCGGGCAAGATCAGCCAGAACGATT TCCGGCAGTTCTATGACCACATGAGTGCAGCCAACAAGACCGTGAACACGCCGGCCACGCACGAGGCGAGCTCGCCCGAT CAGCAAAAGGCCGTCGCGGACATGCTGATGGGCAAGGACGATCCGCCGGCGATCAAGAAGCCCAAAAAGGATGTCGGCAC GTTCCAACAGGGCCTGCATGAGTTCCTCAAGTGGGACAGTAAGATCCTGGACTGGATGTCGGTCGGGCTCAGCGCATTGA ACGGAATTCCCGTGATCGGCGAGATTGCCGATGCGGCGTCGATTGCATTGGAGAGCGAGGCGCAGGCGGCGCAGGTGGTC GACACTGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAACATGGCCGGGGCAGTGGTCGGAGC AGTCGGTGGACCCACGGCCAGAATCGGGGCCAAGGGCGCCGCCAAGGGCGTCGCCGAAGTCGCGGCCAAGGAAGCAGCCG AGGGCGCGGCCAAAGGAACTGCAAAGGGAGCTGCCAAAGGCGCCGGTAAAACCGCGGCCGAACGGCCCAGCGCCGCTGAG TTCGCAAAAGGCTACGTGGCCGGCAGCAACATCAGTAAATCGACTGAAATTCTCAAGACGCCCGTCATGGCGGGCTTGCA CTACGAAGAATATCAACTGGACAAGCAGAAGGACGGAGAGATCCACCAGAAGCTGGAACACGCCGGCGGTGTCCCGGTGG GTAAGCAGATTATCCCCAAAGGCATCGCCGACAACTTCGAGGGAGACGTGCGGCAGAATCTGCGCAATGTCAGGATACGT CGCAGATAA Protein sequence : MSLNMLSTGSNPSQLLGTSSNESSSSDLFGSDSSRDGFDLPSTMDTLFQQIYLVLAALQANTQTGASGDTPANTASGDAD TQMSASDWQATQPIEKRTSWPSLDYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDD KINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKEALKGLQKDPRLFFAIGSQKDGKCGGKIK AQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGK CPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD DKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPD QQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAASIALESEAQAAQVV DTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKGAAKGVAEVAAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAE FAKGYVAGSNISKSTEILKTPVMAGLHYEEYQLDKQKDGEIHQKLEHAGGVPVGKQIIPKGIADNFEGDVRQNLRNVRIR RR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 97 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 82 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 80 |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 64 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 64 |
