Gene Information

Name : hrpD6 (XOC_4452)
Accession : YP_005630684.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrpD6
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4584131 - 4584373 bp
Length : 243 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGATGCAATGACCGATGCGGTCACTCAGGATATGAGCAAGATTCTACAGACCAAGGCGGCGGATCTGTCCGGCGA
GCGGCTGCGCAACGTGGAGGCAGCGCTCGATGCCACTGCGCAACAGATTCGCGGGCACTGGTCTGCGGCGAGCGACCAGG
CCGCGCGCAGCGACTTCAGCGTCCTGCATGACGGCATCACTGCAGCGCGCAACATCGTCGTGCATATCGCCAGCATGCGG
TAA

Protein sequence :
MFDAMTDAVTQDMSKILQTKAADLSGERLRNVEAALDATAQQIRGHWSAASDQAARSDFSVLHDGITAARNIVVHIASMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpD6 BAB07866.1 HrpD6 Virulence Hrp PAI Protein 6e-30 94
hrpD6 YP_198716.1 protein HrpD6 Virulence Hrp PAI Protein 9e-30 94
hrpD6 YP_362149.1 HrpD6 protein Virulence Hrp PAI Protein 1e-26 89
hrpD6 AAD21324.1 HrpD6 Virulence Hrp PAI Protein 7e-27 89
hrpD6 NP_640753.1 HrpD6 protein Virulence Hrp PAI Protein 3e-25 84
XC_3020 YP_244088.1 HrpD6 protein Virulence Hrp PAI Protein 1e-25 84
hrpD6 NP_636596.1 HrpD6 protein Virulence Hrp PAI Protein 1e-25 84
hrpD6 AAP34353.1 HrpD6 Virulence Hrp PAI Protein 5e-25 84