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Name : hrcD (XOC_4451) Accession : YP_005630683.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Virulence Product : type III secretion protein HrcD Function : - COG functional category : - COG ID : - EC number : - Position : 4583183 - 4584121 bp Length : 939 bp Strand : + Note : - DNA sequence : ATGACCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCCCCAGGTCGCTACACCCTGGG GAGTGATCCCCAAACCGATATACGAATAGACGATTGGCCTGGTTGCTCACTCAGTATCGAGGTAGACCAAGATGGGCAGA TTCGCTATAGCACCGACGCGTTGCCAGAAACATCCTTCGTTGCGTTTCAGCCAGTGCGCTTCGGCCCGTTGGTGCTATGT GTTGGTGATGCTGGTGCCGATTGGCCGGACGATGTGGCGTTGCTGGAGCGGCTGCTTTCCCCAGCACCGCCACCAGCGCC GCGCACGTCCAGGCGCAATGTCTTGCGTACTGCGGTGGGCGCCGTGCTAGCACTTGCCGCCGCAGCGTTGCTCACCTCGT TGCAGCCGGCATTTCTGTCCGATGCTGCCACCCGGCAACATCCGGCAACACCCGTCAATCAGGCCAAAGCCTTATTGAAG CAGCTGGGCTTTCGCGAAGCGCACGTAGCACAGGTCGGCACGCGCGTGCTGATCGAAGGCTTGGTGCCCAGCAGCGCCGA TGCTGCACGCTTGCGTGCGCAGGTGCGTCGCTATCACCCAGGCATTGCCGTCAACGTGGCCGTGGTGGACGAGGTGGTGG CGACGCTGCGCGACACCCTGGCTGACCCCGCCCTCAGCGTACGTTACGAAGGCAATGGCGTTTTCTCGATTTCCGGCAGC AGCGACTACGCAGAACGTGCAAGCCGCCGGATTGCCGACGTCCGCAGCGACCTCGGCCCCGAGGTCCGCGCCCTGCACGT GGAGATCAGCCAGCAAGACCCGTCCATAAAAACACCGGACAATTACGACGCGGCATTGCTCGCCGATGGCCTGCACTATG TCGAAACGCCGGATGGTACCAAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA Protein sequence : MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSTDALPETSFVAFQPVRFGPLVLC VGDAGADWPDDVALLERLLSPAPPPAPRTSRRNVLRTAVGAVLALAAAALLTSLQPAFLSDAATRQHPATPVNQAKALLK QLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGIAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSISGS SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADGLHYVETPDGTKHMTSLPQQAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpD5 | YP_198717.1 | protein HrpD5 | Virulence | Hrp PAI | Protein | 6e-113 | 97 |
| hrpD5 | BAB07865.1 | HrpD5 | Virulence | Hrp PAI | Protein | 5e-113 | 97 |
| hrcD | YP_362150.1 | HrcD protein | Virulence | Hrp PAI | Protein | 3e-108 | 93 |
| hrpD5 | AAD21325.1 | HrpD5 | Virulence | Hrp PAI | Protein | 2e-108 | 93 |
| hrpD5 | NP_640754.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 1e-108 | 89 |
| unnamed | AAP34352.1 | HrpD5 | Not tested | Hrp PAI | Protein | 9e-109 | 89 |
| XC_3019 | YP_244087.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 4e-85 | 72 |
| hrpD5 | NP_636597.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 4e-85 | 72 |
