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Name : hrcV (XOC_4444) Accession : YP_005630677.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Virulence Product : type III secretion protein HrcV Function : - COG functional category : - COG ID : - EC number : - Position : 4577857 - 4579779 bp Length : 1923 bp Strand : + Note : - DNA sequence : ATGCGAGCGACAAGGTATTTCGCTTATAGCGGCGAAGTGGCGATCGCCGCCTTGGTGGTGGCGGTCATCGGGCTGATGAT CCTGCCACTGCCAACGCCCATGATCGATACGCTACTGGGCATCAACATCACCCTGAGCGTTGTGCTGTTGATGGTCACGA TGTATGTGCCCGACTCGATCTCACTCTCGTCGTTTCCTTCCCTGCTGCTGTTCACCACCCTACTGCGGTTGTCCTTGAAT ATCGCCTCGACGAAGTCGATCCTTCTGCATGCCGAGGCGGGCCATATCATCGAGAGCTTTGGCGAGTTGGTGGTCGGCGG CAATCTGGTGGTGGGCCTGGTCGTTTTCTTGATCATCACCACCGTGCAGTTCATCGTGATCGCAAAGGGCTCCGAGCGCG TTGCCGAGGTCGGTGCGCGCTTTACGTTGGACGCAATGCCCGGCAAGCAGATGAGTATCGATGCCGACCTGCGTGGCGGC AACTTGACCGCAGATGAGGCACGCCGCAAACGCGCGCGGCTGGCCATTGAAAGCCAACTGCACGGCGGCATGGATGGCGC CATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCTGGTGATCACCATGGTCAACATCCTGGCCGGCATCGTGGTCGGCG TGACGTACCACGGCATGACGGCGGGCGACGCCGCTAACCGCTTTGCGATTCTGTCGGTGGGCGATGCCATGGTGTCGCAG ATCGCCTCACTGCTGATATCGGTGGCTGCCGGCGTCATGATCACCCGCGTGGCCAACGAAAACGAGACCAAGCTCAGCTC GCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAACGCGCGGGCGCTGATGGCAGCGAGCGTGCTGCTGGCCTGCTTTG CATTCGTCCCTGGCTTTCCGGCCGTGCTGTTCCTGCTGCTGGCAGCGGCCGTCGGCGCCGGCGGCTATGCGATCTGGCGC AAGCAACGCGACATCAGCGGCACCGATCAGCGCAAGTTGCCTTCGACGAGCCGTAAAGGTGCCAAAGGCGAGGCGCCACA TATTCGCAAAACCGCTCCTGACTTCGCCTCACCGTTGTCGATGCGGCTGTCGCCGCAGCTGGCTGCTCTGCTCGACCCCG CGCAGCTGGATCAGGCGATCGAAAGCGAGCGCCATCAATTGGTCGAGTTGCTGGGCTTGCCGTTTCCCGGGATCGCGATA TGGCAGAGCGAGTCGCTGCAAGGCATGCAATACGAGGTGTTGATTCACGATGTCCCCGAGACACGCGCCGAACTGCAGAA CACGGAGGACATGCAGGGAGCACTGGCCCGGCAGGCCATCGCCCCCCTGCATGCACGGGCGCACTTGTTCGTCGGCATCC AGGAGACGCAGTGGATGTTGGAGCAGGTGGCCGCGGACTATCCCGGGCTGGTTGCGGAGGTCAACAAGGCGATGCCCGCC CAGCGCATTGCCGATGTGTTGCGGCGTCTACTGGAAGAAAGGATTCCAGTGCGCAATATCAAGAGCATCCTGGAGAGTCT GGTGGTATGGGGGCCGAAGGAAAAGGATCTTCTGATGTTGACCGAATATGTGCGCTGCGACCTCAGCCGTTATCTTGCGC ATACCGCCACCGCAGGCACCGGGCAACTGCCCGCAGTGATGCTCGACCACGCTGTCGAACAATTGATCAGGCAATCGATT CGCGCGACCGCGGCCGGCAATTTCCTGGCACTTCCGCCCGAGCAGGCGAACCAGCTTGTCGAACAGGTGGAACGCATCGT CGGCGGTCAGGCGCAGCATCCGATGGCGGTGGTCGCGTCGATGGACGTGCGCAGATATGTACGCCGCATGATCGAAGCAC GGCTGACTTGGCTGCAGGTCTATTCGTTCCAGGAGCTGGGTTCGGAGGTACAGCTGCAGCCGATCGGTAGAGTGGTGGTG TGA Protein sequence : MRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLN IASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGG NLTADEARRKRARLAIESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQ IASLLISVAAGVMITRVANENETKLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYAIWR KQRDISGTDQRKLPSTSRKGAKGEAPHIRKTAPDFASPLSMRLSPQLAALLDPAQLDQAIESERHQLVELLGLPFPGIAI WQSESLQGMQYEVLIHDVPETRAELQNTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVNKAMPA QRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQLIRQSI RATAAGNFLALPPEQANQLVEQVERIVGGQAQHPMAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 97 |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | YP_005630677.1 | type III secretion protein HrcV | VFG0064 | Protein | 2e-98 | 44 |
| hrcV | YP_005630677.1 | type III secretion protein HrcV | VFG0198 | Protein | 8e-88 | 42 |
| hrcV | YP_005630677.1 | type III secretion protein HrcV | VFG0384 | Protein | 6e-93 | 41 |
