|
Name : hrcU (XOC_4443) Accession : YP_005630676.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Virulence Product : type III secretion protein HrcU Function : - COG functional category : - COG ID : - EC number : - Position : 4576775 - 4577848 bp Length : 1074 bp Strand : + Note : - DNA sequence : ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAAGGACGGGGAAGTTCCGGTCAGCCC GGACGTCACTGCAGCCGCGGTGCTCTTCGGCGCGTTATTGGTGATGAAGTCGGCCGGCGATTACTTCGTCGATCACATGC GCGCATTGACGAGGATCGGCTTCGATTTTTTGGAAAATACACGCGATGCAACGGCGATAAACCGTGCACTCGCCCATATC GGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCGTGCCTGGTGGCTGGCTTGGTAGGCGGTGCGTTTCAGAC GGGCCTGAACGCCTCGCTCAAGCCGGTGTCGCCCAAGTTCGATTCGCTCAATCCCGCAAACGGGGTCAAGAAACTTTTTT CGTTGCGAAGTCTCATCAATCTACTCAAGTTGGTCATCAAGGCCGTCCTGATTGGCGTGGTGCTGTGGGTCGGTATCCGC GCCCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGATATTGCCCAAATTGCCTGGCGCACCCTGAGCAT ACTCTTCGCACTGGGCGTGCTGCTGTTCATACTGGTCGGCGCTGCAGACTGGAGCGTACAGCACTGGCTGTTCATCCGCG ACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAATACAAGGAAAGCGAGGGCGACCCCGAGATCAAGGGCAAGCGCAAG GAATTCGCCAAGGAACTGGTCTTCGGCGACCCCCGCGAACGCGTCGTCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCGGTGGCACTGGCCTACGAGCCCGATGACTTCGGCTTGCCGCAGGTTGTTGCCAAGGGCGTAGACGACGGCGCGC TGGAACTGCGCGCCTTTGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCACGTGCGCTGTATCAGGTA GAATTGGGCGACGCAATCCCCGAGCAATTGTTCGAAACGGTTGCAGTGGTGTTGCGCTGGGTCGATGGACTCGGTCGCGA CCACGGCGACGGCAATGGACCCCTGCCATGCTAG Protein sequence : MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGFDFLENTRDATAINRALAHI GIQGLLLMLPFLAACLVAGLVGGAFQTGLNASLKPVSPKFDSLNPANGVKKLFSLRSLINLLKLVIKAVLIGVVLWVGIR ALMPMIIGLAYETPLDIAQIAWRTLSILFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRK EFAKELVFGDPRERVVKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQV ELGDAIPEQLFETVAVVLRWVDGLGRDHGDGNGPLPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-144 | 97 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-146 | 97 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-140 | 93 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-140 | 91 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-139 | 91 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-123 | 83 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-123 | 83 |
