Gene Information

Name : hrpB1 (XOC_4442)
Accession : YP_005630675.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrpB1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4576105 - 4576560 bp
Length : 456 bp
Strand : -
Note : -

DNA sequence :
GTGGAGAAGATTCAATGTCCCGGGTCGGTCGTGAGTGGGCTCATCGAGCTGATCACGGTGGGACTCACCCATGAAAAGAT
TCAGGACGCTGCCGCTGTCCTGGCCGCAGTGCGAATACTGCGGCCAGAGCTGAAAGCGCTGGACACGTTCGATGCATGGA
TTTCGATCAAGCGCGGCAATTACGTGGACGGTGCGCGCCTATTGCGCGAGCTGGAGGGCGACGCCGGCTCCAAGCCGCTG
TGCAGGGCCTTGTACGCCTGCTGTCTGTTCGCGATGGGGGACCCGTCGTGGCATGGCGTTGCAGACGGGCTGATCGAAGA
AGACGCCGATGCCGAAGCGGTGGCCTTGGTCAAGGCGCTTTCCGGGCGAACCACCCCAATGTCCGCACCGGCGGACGTAC
CGGTTGAATCGTCAGCACCTATGGAAGTTCCGAACTCGCAGTACCTGCGCGCCTGA

Protein sequence :
MEKIQCPGSVVSGLIELITVGLTHEKIQDAAAVLAAVRILRPELKALDTFDAWISIKRGNYVDGARLLRELEGDAGSKPL
CRALYACCLFAMGDPSWHGVADGLIEEDADAEAVALVKALSGRTTPMSAPADVPVESSAPMEVPNSQYLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB1 BAB07857.1 HrpB1 Virulence Hrp PAI Protein 9e-52 99
hrpB1 AAF61286.1 HrpB1 Virulence Hrp PAI Protein 9e-52 99
hrpB1 YP_198725.1 protein HrpB1 Virulence Hrp PAI Protein 1e-51 99
hrpB1 AAP34344.1 HrpB1 Virulence Hrp PAI Protein 1e-50 95
hrpB1 AAB08456.1 HrpB1 Virulence Hrp PAI Protein 7e-51 95
hrpB1 NP_640762.1 HrpB1 protein Virulence Hrp PAI Protein 2e-50 95
hrpB1 YP_362158.1 HrpB1 protein Virulence Hrp PAI Protein 1e-50 95
XC_3011 YP_244079.1 HrpB1 protein Virulence Hrp PAI Protein 2e-42 83
hrpB1 NP_636605.1 HrpB1 protein Virulence Hrp PAI Protein 2e-42 83