Gene Information

Name : hrpB2 (XOC_4441)
Accession : YP_005630674.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrpB2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4575679 - 4576071 bp
Length : 393 bp
Strand : -
Note : -

DNA sequence :
ATGACGCTCATTCCTCCTGTCCAAGCGATTGCCGGTGCCAGTGCTGCCGCGACCCAAGCGCTGTCGCCGGTGGCAGCGCC
CAATCAGGCGCTTGTGAATCGCTTTCAAGCGCTGATGCAATCCTCCAGCCCCTTGCCGCCCTCCATGCAGCGGGTGGGCA
GCCCGAGCATGATGAGCCGGGTGGTCGATGTGCAGAACGATGGCGTGCGCACCATCGCCGAGCACATTGATGCCTTCACC
ATGCAGGCACCGACCATGGGGCTGCAGGAAATGGCAGCGCAGCAGATCAAGTTGATGCACGAGCTGACCATGGTCGGCTT
CAACCTCAATGTCAGTGTCGGCGTGGCGCAATCGGGAAAGAACGCCGTGCAGACGCTGGTGAAGAACCAGTAG

Protein sequence :
MTLIPPVQAIAGASAAATQALSPVAAPNQALVNRFQALMQSSSPLPPSMQRVGSPSMMSRVVDVQNDGVRTIAEHIDAFT
MQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGKNAVQTLVKNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB2 BAB07856.1 HrpB2 Virulence Hrp PAI Protein 3e-36 99
hrpB2 AAF61285.1 HrpB2 Virulence Hrp PAI Protein 3e-36 99
hrpB2 YP_198726.1 protein HrpB2 Virulence Hrp PAI Protein 5e-36 99
hrpB2 AAP34343.1 HrpB2 Virulence Hrp PAI Protein 4e-36 98
hrpB2 NP_640763.1 HrpB2 protein Virulence Hrp PAI Protein 6e-36 98
hrpB2 YP_362159.1 HrpB2 protein Virulence Hrp PAI Protein 6e-36 98
hrpB2 AAB08457.1 HrpB2 Virulence Hrp PAI Protein 1e-35 97
XC_3010 YP_244078.1 HrpB2 protein Virulence Hrp PAI Protein 5e-27 76
hrpB2 NP_636606.1 HrpB2 protein Virulence Hrp PAI Protein 5e-27 76