Gene Information

Name : hrpB4 (XOC_4439)
Accession : YP_005630672.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrpB4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4574276 - 4574905 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence : 
ATGGACAACACGCGGATCGACAATGCGGCACGCTGTGTCCAGCGCTGGACCGACGCGTTGGCGCAACTGGCAGAATCGTT
GGACGCCGCACGGGTGGCGCATTGGCTTGGTCCGGTGGCAGCGTCGGGCTGGGCAGCGGCGCCCGTCTACCGTCGTATGC
GGGTAATCCAGGCGTGGTCGGGATGGTCGGAATTATCGCCGTCTGCACTCGGCCTGCACGCGAACCAACTTGCCCTGCTG
ATGCCCGCGCGATTGGCCAATGTCCTGATCGCGCGTGCGCTGTTCTCGCGCGGGTTGGCCGTGCGCCGGTGCATCGAGCG
CGAACGTCTGGACTGGCTCGAACAGTGTGTGGGGCCGGCCGTGCTTGAGCATGTGCGCCAGAACGCGTCGGCCGGCCTGT
CCTTGCCCCTGTTGCCACGCGATGCCGATCAGGCGGCGTGGGTCGGCGACGGTTGGCGTCGGATGCAGGCCGATGGCGTC
TGGTCCAACCCGGTTGTTGCCAAGCTGCTGGCGCTGTCCTTGCCGTTGGGCGCCGCGCAGGTGGCGACCGTTGCAGCAGA
CGGTGCGAGCGCTGCATTCCTGACCGCGCTTTCCACCCTGATGCCGGAGGCGTCATGCGTGTCTGGTTGA

Protein sequence : 
MDNTRIDNAARCVQRWTDALAQLAESLDAARVAHWLGPVAASGWAAAPVYRRMRVIQAWSGWSELSPSALGLHANQLALL
MPARLANVLIARALFSRGLAVRRCIERERLDWLEQCVGPAVLEHVRQNASAGLSLPLLPRDADQAAWVGDGWRRMQADGV
WSNPVVAKLLALSLPLGAAQVATVAADGASAAFLTALSTLMPEASCVSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB4 YP_198728.1 protein HrpB4 Virulence Hrp PAI Protein 8e-77 99
hrpB4 BAB07854.1 HrpB4 Virulence Hrp PAI Protein 6e-77 99
hrpB4 AAF61283.1 HrpB4 Virulence Hrp PAI Protein 3e-73 98
hrpB4 AAB08459.1 HrpB4 Virulence Hrp PAI Protein 4e-75 97
hrpB4 YP_362161.1 HrpB4 protein Virulence Hrp PAI Protein 6e-75 97
hrpB4 AAP34341.1 HrpB4 Virulence Hrp PAI Protein 1e-73 94
hrpB4 NP_640765.1 HrpB4 protein Virulence Hrp PAI Protein 1e-73 94
XC_3008 YP_244076.1 HrpB4 protein Virulence Hrp PAI Protein 8e-52 68
hrpB4 NP_636608.1 HrpB4 protein Virulence Hrp PAI Protein 8e-52 68