Gene Information

Name : hrcL (XOC_4438)
Accession : YP_005630671.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrcL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4573590 - 4574291 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
ATGCGTGTCTGGTTGAGGTCAACGCCCGACGCGATCGGCCTGGATTGCGATGTCATTCCGCGCGAGGCGCTGGGCTCGGT
GTTGGCGCTGGATGCTGCCACTGTCGAAGTGCACGCACGCTGCGAGCAGGCGCTGAGCCAGGCGCAGGCACGTGCACAGA
CGCTGATCGACGAGGCCCAGCAGCAGGCCGAGGCGATCCTGCACGATGCGCGTCAAAAGGCCGAGCGCAGCGCACGCCTG
GGATATGCAGCCGGCCTGCGACGTCAGCTTGATGAGTGGAACGAATCCGGCCTGCGCCATGCCTTTGCCGCCGAAACGGC
AGCGCACCGGGCACGTGAGCGCCTGGCTGAGATTGTGGCGCGCACCTGCGAGCACATCATCCTCGGACACGATCCCGCGG
CGCTGTATGCGCGTGCGGCGCAGGCCTTGGAAGGTGCCCTGGACGAGGCCAAAGCCTTGCGCGTGAGCGTGCACCCCGAC
GCGCTGGACGCTGCGCGGCGCGCCTTCGACGCGGCCGCCACCGAGGCGGGCTGGACCCTGCAGGTAGAGCTGTGCGGCGA
TGCCGATCTGGCCGTGGGCGCCTGCGTGTGCGAATGGGATACGGGCGTGTTCGAGACCGATCTGCGCGATCAGCTGCGCA
GTCTGCGGCGCGTCATCCGCCGCGTGTTGGCCGCACCCCAGGAGCCCGCGGATGCTGGCTGA

Protein sequence :
MRVWLRSTPDAIGLDCDVIPREALGSVLALDAATVEVHARCEQALSQAQARAQTLIDEAQQQAEAILHDARQKAERSARL
GYAAGLRRQLDEWNESGLRHAFAAETAAHRARERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD
ALDAARRAFDAAATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPADAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB5 BAB07853.1 HrpB5 Virulence Hrp PAI Protein 2e-63 97
hrpB5 AAF61282.1 HrpB5 Virulence Hrp PAI Protein 2e-63 97
hrpB5 YP_198729.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 4e-63 97
hrpB5 AAP34340.1 HrpB5 Virulence Hrp PAI Protein 3e-64 96
hrcL YP_362162.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 4e-62 96
hrpB5 NP_640766.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 5e-64 96
hrpB5 AAB08460.1 HrpB5 Virulence Hrp PAI Protein 3e-62 96
hrpB5 NP_636609.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 2e-49 78
XC_3007 YP_244075.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 3e-49 77