Gene Information

Name : hrcT (XOC_4435)
Accession : YP_005630668.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : type III secretion protein HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4570943 - 4571773 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACGCCACCGATGCCTTGCTGGCCCTTTCCTCGCAGGGCGTGTCGCTGTTGACCCTGCTGGCACTGTGCGGTGT
GCGCGTGTTGGTGATGTTCATCGTGCTACCGGCAACGGCACAGGACAGTCTTCCCGGAATCGCGCGCAACGGCGTGATCT
ACGTCCTGAGCTCGTTCATCGCCTATGGGCAGCCGGCCGATGCGCTGGTGAAGATCCAGACGGTCGGCCTGGTCGGGGTG
GTGTTCAAGGAGGCGTTCATCGGTCTGCTGATCGGGTTTGCGGCATCGACGGTGTTCTGGATCGCCGAGAGCGTTGGCCT
GCTGATCGACGACCTTGCCGGTTACAACAATGTGCAGATGACCAACCCGCTCAGCGGCCAGCAAAGCACGCCGGTGTCCA
CGGTACTGCTGCAACTGGCCATCGTGTCGTTCTACGCATTGGGCGGCATGCTGATGTTGCTCGGCGCGTTGTTCGAATCG
TTTCACTGGTGGCCGCTGACCCAGCTTGGGCCGAACATGGGGGCGGTTGCCGAATCGTTCGTGATCCGGCAATACGACAG
CATGATCGCCGCCGTCGTCAAACTGTCCGCACCGGTGATGCTGGTGCTTGTGCTGGTGGATCTTGCGATCGGCCTGGTGG
CGCGAGCGGCCGACAAGCTCGAACCGTCGAACTTGAGTCAGCCAATCCGTGGGGTACTGGCGCTATTGCTGCTCGCCTTG
CTGACCAGCGTCTTCATCGCGCAATTCGGCGAAGCACTCGGTTTCCTGCATTTCCAGCAGCAATTGCACGATGCCGCCAA
CCTGGGTGGCAAGGCGGGCGCGTCGCACTGA

Protein sequence :
MNDATDALLALSSQGVSLLTLLALCGVRVLVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALVKIQTVGLVGV
VFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FHWWPLTQLGPNMGAVAESFVIRQYDSMIAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANLGGKAGASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 4e-102 98
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 4e-102 98
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 6e-102 98
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 4e-100 97
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 3e-100 97
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 3e-100 96
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 4e-100 96
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 8e-92 86
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 8e-92 86