Gene Information

Name : XOC_4404 (XOC_4404)
Accession : YP_005630638.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : ISXo8
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4530991 - 4532373 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence :
GTGTTACAAATAATCGTACCTTTGTGCCACTATTGGAAGACCTTCAGGCCGCGCGGGAGAGCTGTGTTGAATAGGACACT
GGAAGTGCGTTTTGAACAGTACGGGGAAGTAGTGGCTGCCGCCCTGTCCCATGCGGATCGCAAACAGCCCGCACACTGGT
ACCTGAAGGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGCACCCGCAGAACGTGCGC
TCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTGGCGGCGGTAGCGGCACA
GGTGCTGCCGACCCTGAGCAAGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATTTTCAAAGAAGGGGGTGC
ATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTGCCGTGAGTTTGTCGATC
GCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAGGACACTGTGCGGCGCAA
GAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGATCGACAGCGCGCTGGCGA
CAGGGATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCCAGACCCACTGGCGAGACCAGCTCAGCGAACGC
GGCCTGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCTGCGCCCATGCCGCCAGC
CAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTCGGTACATGAAGTCGCGC
AGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGAGGCAACGCTCAGTTCGCGGTTCGCGGCG
GTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCGGGAGAGTCCGA
GCCCCGCCACTACTGGTTCTCGACGCTACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCACGGCACACGGCCGATGGC
GGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCAACTGGCGTGGTTTTCAC
CATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAACTCCGTCGCATT
CAAGATGCCTGCAGTATCCAAAAGCGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACCATCCCAACTCGATTGCC
ACGCTGGCCTTCGGACTGGCTAG

Protein sequence :
MLQIIVPLCHYWKTFRPRGRAVLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVR
SAHQSMHHLVADADWSDQALLAAVAAQVLPTLSKKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSI
ANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTQTHWRDQLSER
GLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSEATLSSRFAA
VRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAHGRWRIERDYQELKSELGLHHYEGRNWRGFH
HHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XOO0073 YP_198712.1 ISXo8 transposase Not tested Hrp PAI Protein 1e-147 98
XOO0069 YP_198708.1 ISXo8 transposase Not tested Hrp PAI Protein 8e-135 97